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MS006808 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006808
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin family protein
Genome locationscaffold60:633180..633398
RNA-Seq ExpressionMS006808
SyntenyMS006808
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0006464 - cellular protein modification process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily
IPR039732 - Ubiquitin-like modifier Hub1/Ubl5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7058928.1 unnamed protein product [Microthlaspi erraticum]6.9e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

KAG5239708.1 ubiquitin protein [Salix suchowensis]1.2e-3297.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        M+EVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

XP_002863802.1 ubiquitin-like protein 5 [Arabidopsis lyrata subsp. lyrata]6.9e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

XP_006485697.1 ubiquitin-like protein 5 [Citrus sinensis]1.5e-3298.61Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

XP_030925108.1 ubiquitin-like protein 5 [Quercus lobata]1.2e-3297.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

TrEMBL top hitse value%identityAlignment
A0A1J3HSG3 Ubiquitin-like protein 53.3e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

A0A1S3C3F9 ubiquitin-like protein 53.3e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

A0A398AR32 Ubiquitin-like domain-containing protein3.3e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

A0A6J1BXR9 ubiquitin-like protein 53.3e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

A0A6J1I1R2 ubiquitin-like protein 53.3e-3398.63Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

SwissProt top hitse value%identityAlignment
Q3T0Z3 Ubiquitin-like protein 54.0e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q6EGX7 Ubiquitin-like protein 54.0e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9BZL1 Ubiquitin-like protein 54.0e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9EPV8 Ubiquitin-like protein 54.0e-2880.56Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY
        MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DYEIHDGM LELYY
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY

Q9FGZ9 Ubiquitin-like protein 52.0e-3597.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

Arabidopsis top hitse value%identityAlignment
AT3G45180.1 Ubiquitin-like superfamily protein3.5e-3594.52Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH

AT5G42300.1 ubiquitin-like protein 51.4e-3697.26Show/hide
Query:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH
        MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYY+
Subjt:  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTTCGGGTAAAGTGCAACGAAGACGACACGATCGGAGACTTGAAGAAGCTCGTCGCTGCTCAGACCGGAAC
CAGGGCCGAGAAGATCAGGATCCAGAAGTGGTACAACATCTACAAGGATCACATCACGCTCAAGGATTACGAGATCCATGACGGCATGGGACTCGAGCTCTATTACCAT
mRNA sequenceShow/hide mRNA sequence
ATGATCGAGGTGGTGCTCAACGATCGTCTCGGGAAGAAGGTTCGGGTAAAGTGCAACGAAGACGACACGATCGGAGACTTGAAGAAGCTCGTCGCTGCTCAGACCGGAAC
CAGGGCCGAGAAGATCAGGATCCAGAAGTGGTACAACATCTACAAGGATCACATCACGCTCAAGGATTACGAGATCCATGACGGCATGGGACTCGAGCTCTATTACCAT
Protein sequenceShow/hide protein sequence
MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDYEIHDGMGLELYYH