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MS006820 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006820
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCalpain-type cysteine protease DEK1
Genome locationscaffold60:774136..774397
RNA-Seq ExpressionMS006820
SyntenyMS006820
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK09969.1 calpain-type cysteine protease DEK1 [Cucumis melo var. makuwa]6.9e-0848.28Show/hide
Query:  GDRPL--MFPCLYHLSSLKCR-PNSFVIFS-ESTSLNLDFCRPLSDRKSTNLVVLIFSL-SNPLLFGCRDFWVRSPNPSKGFSCRSF
        G+RPL  +FPCLYHLSSLK      F++++  S S +  F R LSDR+++N+V LI  L S+    G RD  V SP P +GF C+SF
Subjt:  GDRPL--MFPCLYHLSSLKCR-PNSFVIFS-ESTSLNLDFCRPLSDRKSTNLVVLIFSL-SNPLLFGCRDFWVRSPNPSKGFSCRSF
TrEMBL top hitse value%identityAlignment
A0A5D3CI74 Calpain-type cysteine protease DEK13.3e-0848.28Show/hide
Query:  GDRPL--MFPCLYHLSSLKCR-PNSFVIFS-ESTSLNLDFCRPLSDRKSTNLVVLIFSL-SNPLLFGCRDFWVRSPNPSKGFSCRSF
        G+RPL  +FPCLYHLSSLK      F++++  S S +  F R LSDR+++N+V LI  L S+    G RD  V SP P +GF C+SF
Subjt:  GDRPL--MFPCLYHLSSLKCR-PNSFVIFS-ESTSLNLDFCRPLSDRKSTNLVVLIFSL-SNPLLFGCRDFWVRSPNPSKGFSCRSF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GACTGCTGGTTGGGAGATAGACCTCTTATGTTTCCCTGCCTCTATCATCTTTCCTCTTTGAAGTGTCGACCCAATTCTTTTGTCATTTTCTCCGAATCCACCTCACTTAA
TCTTGATTTTTGTCGACCTTTGTCTGATAGGAAATCCACGAACTTAGTTGTGCTAATTTTTTCGTTGAGTAATCCACTTTTGTTTGGGTGCAGGGACTTTTGGGTTCGGT
CTCCTAATCCTTCTAAAGGGTTCTCCTGTCGTTCTTTC
mRNA sequenceShow/hide mRNA sequence
GACTGCTGGTTGGGAGATAGACCTCTTATGTTTCCCTGCCTCTATCATCTTTCCTCTTTGAAGTGTCGACCCAATTCTTTTGTCATTTTCTCCGAATCCACCTCACTTAA
TCTTGATTTTTGTCGACCTTTGTCTGATAGGAAATCCACGAACTTAGTTGTGCTAATTTTTTCGTTGAGTAATCCACTTTTGTTTGGGTGCAGGGACTTTTGGGTTCGGT
CTCCTAATCCTTCTAAAGGGTTCTCCTGTCGTTCTTTC
Protein sequenceShow/hide protein sequence
DCWLGDRPLMFPCLYHLSSLKCRPNSFVIFSESTSLNLDFCRPLSDRKSTNLVVLIFSLSNPLLFGCRDFWVRSPNPSKGFSCRSF