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MS006828 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006828
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold60:941547..941741
RNA-Seq ExpressionMS006828
SyntenyMS006828
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051747.1 hypothetical protein E6C27_scaffold60G001390 [Cucumis melo var. makuwa]1.9e-1052.78Show/hide
Query:  RRVAIALAVVF-LIIVNGCFPVDGRHLK-----------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRK
        + VA+A+ ++  L+I+N  F VDGRHL+           E++ LRG   YETSEYNHHGCYRSDYNCWSN++
Subjt:  RRVAIALAVVF-LIIVNGCFPVDGRHLK-----------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRK
KAG6607148.1 hypothetical protein SDJN03_00490, partial [Cucurbita argyrosperma subsp. sororia]6.3e-1460.56Show/hide
Query:  MRRVAIALAVVFLIIVNGCFPVDGRHLK------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRKQIGE
        MRRVA+ + ++F+II N  F  DGRHLK      E +NL    HYET+EYNHHGCYRSDYNCWSNRK+  E
Subjt:  MRRVAIALAVVFLIIVNGCFPVDGRHLK------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRKQIGE
TrEMBL top hitse value%identityAlignment
A0A5D3CI92 Uncharacterized protein9.3e-1152.78Show/hide
Query:  RRVAIALAVVF-LIIVNGCFPVDGRHLK-----------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRK
        + VA+A+ ++  L+I+N  F VDGRHL+           E++ LRG   YETSEYNHHGCYRSDYNCWSN++
Subjt:  RRVAIALAVVF-LIIVNGCFPVDGRHLK-----------ETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACGTGTAGCGATTGCACTAGCGGTGGTGTTTTTGATTATCGTCAACGGTTGCTTCCCTGTCGATGGAAGGCATTTGAAGGAGACGAGAAACTTAAGAGGCACGCA
CCATTATGAAACTAGCGAATATAACCACCATGGTTGCTATAGAAGCGATTATAATTGCTGGAGTAATAGAAAGCAGATTGGAGAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACGTGTAGCGATTGCACTAGCGGTGGTGTTTTTGATTATCGTCAACGGTTGCTTCCCTGTCGATGGAAGGCATTTGAAGGAGACGAGAAACTTAAGAGGCACGCA
CCATTATGAAACTAGCGAATATAACCACCATGGTTGCTATAGAAGCGATTATAATTGCTGGAGTAATAGAAAGCAGATTGGAGAA
Protein sequenceShow/hide protein sequence
MRRVAIALAVVFLIIVNGCFPVDGRHLKETRNLRGTHHYETSEYNHHGCYRSDYNCWSNRKQIGE