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MS006829 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006829
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold60:945638..945895
RNA-Seq ExpressionMS006829
SyntenyMS006829
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607149.1 hypothetical protein SDJN03_00491, partial [Cucurbita argyrosperma subsp. sororia]9.6e-1050Show/hide
Query:  RRILLLGFAIGLLLLISSSLFPSADAIRRPAAMEAQKVEEKWQPSNSEDGK-GHIGHFPDESSPKNHHFIPREAFNNYGGSDNGGG
        R +L++GFAIG+LL++SSS  P+ADA            + KW+   +EDGK GH+G +PD+S  KNHHFIPR+AFNNY     G G
Subjt:  RRILLLGFAIGLLLLISSSLFPSADAIRRPAAMEAQKVEEKWQPSNSEDGK-GHIGHFPDESSPKNHHFIPREAFNNYGGSDNGGG
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G45160.1 Putative membrane lipoprotein7.6e-0538.46Show/hide
Query:  IGLLLLISSSLFPSADAIRRPAAMEAQKVEEKWQPSNSEDGKGHIGHFPDESSPKNHHFIPREAFNNY--GGSDNGGG
        I ++++I SS   + + I R    E++KV  +      ED    I H    SS +NHH+IPR+ F NY  GG +NGGG
Subjt:  IGLLLLISSSLFPSADAIRRPAAMEAQKVEEKWQPSNSEDGKGHIGHFPDESSPKNHHFIPREAFNNY--GGSDNGGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAATTCTATTGCTTGGCTTCGCAATTGGGCTGTTGCTTCTGATTAGCTCCTCTTTGTTTCCTTCAGCTGATGCAATAAGGCGACCAGCAGCCATGGAAGCTCA
GAAGGTGGAAGAAAAATGGCAGCCTAGTAATAGTGAAGATGGGAAGGGCCATATTGGTCATTTCCCAGATGAGAGCAGTCCAAAGAACCACCATTTCATCCCAAGAGAAG
CTTTCAACAACTATGGAGGCAGTGATAATGGTGGAGGC
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAATTCTATTGCTTGGCTTCGCAATTGGGCTGTTGCTTCTGATTAGCTCCTCTTTGTTTCCTTCAGCTGATGCAATAAGGCGACCAGCAGCCATGGAAGCTCA
GAAGGTGGAAGAAAAATGGCAGCCTAGTAATAGTGAAGATGGGAAGGGCCATATTGGTCATTTCCCAGATGAGAGCAGTCCAAAGAACCACCATTTCATCCCAAGAGAAG
CTTTCAACAACTATGGAGGCAGTGATAATGGTGGAGGC
Protein sequenceShow/hide protein sequence
MRRILLLGFAIGLLLLISSSLFPSADAIRRPAAMEAQKVEEKWQPSNSEDGKGHIGHFPDESSPKNHHFIPREAFNNYGGSDNGGG