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MS006855 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006855
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionpentatricopeptide repeat-containing protein At2g13600-like
Genome locationscaffold871:16416..16520
RNA-Seq ExpressionMS006855
SyntenyMS006855
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0022857 - transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159320.1 pentatricopeptide repeat-containing protein At2g13600-like [Momordica charantia]3.3e-0997.14Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKYALC ALNSCAKTLNLFNGLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
XP_022948515.1 pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita moschata]1.4e-0788.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT+NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
XP_022998877.1 pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita maxima]1.4e-0788.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT+NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
XP_023521522.1 pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp. pepo]1.4e-0788.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT+NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
XP_038896055.1 pentatricopeptide repeat-containing protein At3g12770-like [Benincasa hispida]5.3e-0788.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
TrEMBL top hitse value%identityAlignment
A0A1S3CML0 pentatricopeptide repeat-containing protein At2g13600-like4.8e-0682.86Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLT Y+LC AL+SCAKT NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
A0A5A7UEE6 Pentatricopeptide repeat-containing protein4.8e-0682.86Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLT Y+LC AL+SCAKT NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
A0A6J1DYD1 pentatricopeptide repeat-containing protein At2g13600-like1.6e-0997.14Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKYALC ALNSCAKTLNLFNGLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
A0A6J1GA23 pentatricopeptide repeat-containing protein At2g13600-like6.7e-0888.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT+NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
A0A6J1K975 pentatricopeptide repeat-containing protein At2g13600-like6.7e-0888.57Show/hide
Query:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
        AKLTKY+LC ALNSCAKT+NLF GLQIHAQIVKIG
Subjt:  AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCAAAATTGACGAAGTATGCTCTCTGCTATGCTCTTAATTCTTGTGCTAAGACTTTGAATTTGTTTAATGGTCTGCAAATTCACGCCCAGATTGTTAAAATTGGA
mRNA sequenceShow/hide mRNA sequence
GCAAAATTGACGAAGTATGCTCTCTGCTATGCTCTTAATTCTTGTGCTAAGACTTTGAATTTGTTTAATGGTCTGCAAATTCACGCCCAGATTGTTAAAATTGGA
Protein sequenceShow/hide protein sequence
AKLTKYALCYALNSCAKTLNLFNGLQIHAQIVKIG