; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006877 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006877
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionshugoshin-1
Genome locationscaffold871:407038..409346
RNA-Seq ExpressionMS006877
SyntenyMS006877
Gene Ontology termsGO:0034090 - maintenance of meiotic sister chromatid cohesion (biological process)
GO:0000775 - chromosome, centromeric region (cellular component)
InterPro domainsIPR044693 - Shugoshin, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147313.1 SHUGOSHIN 1 [Cucumis sativus]1.6e-7162.55Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++S+   P + VIDQLVKENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAK L +EGKA  MNN NS WQEGEK TGQ SL    TD K+ NGN K  GRT+S+  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        HCVRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ + EE   L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

XP_008463230.1 PREDICTED: uncharacterized protein LOC103501433 isoform X1 [Cucumis melo]7.9e-7161.09Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++ K     + VIDQLV+ENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAKCL +E     MNN NS WQEGE+ TG+ SL    TD K+CNGN K  GRT+SQ  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        H VRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ ++EEA  L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

XP_008463238.1 PREDICTED: uncharacterized protein LOC103501433 isoform X2 [Cucumis melo]1.2e-7161.82Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++ K     + VIDQLV+ENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAKCL +EGK+  MNN NS WQEGE+ TG+ SL    TD K+CNGN K  GRT+SQ  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        H VRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ ++EEA  L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

XP_022152830.1 shugoshin-1 [Momordica charantia]2.9e-12187.96Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQ+VIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQC--NAIFLLVFFRVLLFSLFIFPFRH
              VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQ    +      +  +     +   RH
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQC--NAIFLLVFFRVLLFSLFIFPFRH

Query:  CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
Subjt:  CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

XP_038895468.1 SHUGOSHIN 2 isoform X2 [Benincasa hispida]2.1e-7163.41Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGSR+RNKLADITNSK+++ H+E ++          VIDQLVKENMALMKLI+ERNKIIDLS AELQ LRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAKCLN++GKA  MNN NS WQEGEKPTGQ SL    TD K+CNGN K  GRT+SQ  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQ-SGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        HCVRR+ S RFR QVRD EE LFEIED+K  A+  EEEE+E KNN     +P    R S+GRP  RAA++IQSYKE
Subjt:  HCVRRQ-SGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

TrEMBL top hitse value%identityAlignment
A0A0A0LSM0 Uncharacterized protein7.7e-7262.55Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++S+   P + VIDQLVKENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAK L +EGKA  MNN NS WQEGEK TGQ SL    TD K+ NGN K  GRT+S+  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        HCVRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ + EE   L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

A0A1S3CIS6 uncharacterized protein LOC103501433 isoform X13.8e-7161.09Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++ K     + VIDQLV+ENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAKCL +E     MNN NS WQEGE+ TG+ SL    TD K+CNGN K  GRT+SQ  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        H VRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ ++EEA  L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

A0A1S3CJ55 uncharacterized protein LOC103501433 isoform X25.9e-7261.82Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKT SIGS++RNKLADITNSK+++ H+E E++ K     + VIDQLV+ENM LMKLI+ERNKII+LS AEL+KLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR
              +KSLEHEIECKEALLRAKCL +EGK+  MNN NS WQEGE+ TG+ SL    TD K+CNGN K  GRT+SQ  ++     +  ++    +   R
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL---KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFR

Query:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        H VRR S RFR+QVRD EE LFEIED+K  A    E+E+   ++ ++EEA  L QR SIGRPLRRAAEKI+SYKE
Subjt:  HCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

A0A6J1DF28 shugoshin-11.4e-12187.96Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQ+VIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQC--NAIFLLVFFRVLLFSLFIFPFRH
              VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQ    +      +  +     +   RH
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQC--NAIFLLVFFRVLLFSLFIFPFRH

Query:  CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
Subjt:  CVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

A0A6J1KBG4 shugoshin-1 isoform X14.2e-7060.73Show/hide
Query:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--
        MAK  SIGSRVRNKLADITNSK+++ H+E E +S+    NQDV+DQLV ENMALMKL++E+N+IIDLS AEL KLR  IQKLQLQNW LAQSNS FLA  
Subjt:  MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--

Query:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL--KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFRH
              +KSL HE+ECKEALL+A  LN  GKAG MNNGNS WQE EKPT Q  L  KTD KAC+GN+K +GR ++Q  ++     +            RH
Subjt:  ------VKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSL--KTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFRH

Query:  CVRRQSGRFRNQVRDPEENLFEI-EDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        CVR QSGRFR Q+R PE+N FEI ED+KF ATG E+EEE + NN+    +    QR  IGRPL RAAEKIQSYKE
Subjt:  CVRRQSGRFRNQVRDPEENLFEI-EDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

SwissProt top hitse value%identityAlignment
E3VXF2 Shugoshin-13.6e-1036.23Show/hide
Query:  LADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEI
        LADITN+    P       + ++H   DV+    KEN  L  L+ ERNK+I++S  ELQK+R ++Q +Q +N  L Q+NS+  A        +K L+HE+
Subjt:  LADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEI

Query:  ECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQS
         C  A+L+ K   LE  +   NN  +  +  EK T  S
Subjt:  ECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQS

F4J3S1 SHUGOSHIN 18.9e-0935.61Show/hide
Query:  MAKTPSIGSRVRNKLADIT---NSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFL
        M   P + S  R KL DIT   N K++            L  +++  + L KEN  LMK+++ER+ I     ++L+KLR   QK+Q QN  LAQ+N+R L
Subjt:  MAKTPSIGSRVRNKLADIT---NSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFL

Query:  A--------VKSLEHEIECKEALLRAKCLNLE
        A        +K L+HE+ CK  L+ A+ + L+
Subjt:  A--------VKSLEHEIECKEALLRAKCLNLE

Q0WTB8 SHUGOSHIN 21.3e-1242.71Show/hide
Query:  EYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK
        E +     L  +Q+   +L KENM LMK +  RNK+++LSG E+QKLR +++ +Q +N  LAQ+NS+ LA        +K L+HE+ CK ALL+ K
Subjt:  EYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK

Q4QSC8 Shugoshin-11.5e-1137.42Show/hide
Query:  LADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEI
        LADITN+   KP     +A++++      +  LVKEN  L+ L+ E+ KIIDLS  E+ KLR ++Q  + QN HL Q+NS+ LA        +K L+HE+
Subjt:  LADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEI

Query:  ECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAG
         C  ALL+ K   L+ K     N  +V Q+G K      LKT          H G
Subjt:  ECKEALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAG

Arabidopsis top hitse value%identityAlignment
AT3G10440.1 Shugoshin C terminus6.3e-1035.61Show/hide
Query:  MAKTPSIGSRVRNKLADIT---NSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFL
        M   P + S  R KL DIT   N K++            L  +++  + L KEN  LMK+++ER+ I     ++L+KLR   QK+Q QN  LAQ+N+R L
Subjt:  MAKTPSIGSRVRNKLADIT---NSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFL

Query:  A--------VKSLEHEIECKEALLRAKCLNLE
        A        +K L+HE+ CK  L+ A+ + L+
Subjt:  A--------VKSLEHEIECKEALLRAKCLNLE

AT3G44960.1 unknown protein9.1e-0927.92Show/hide
Query:  SRFLAVKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEG-------EKPTGQSSLKT--------DIKACNGNKKHAGRTKSQCNAIFLLVFFRV
        +R + VK+L HE+ CK ALL+AKC + E K       N++  E        + P+ +  + T         + A   NK  A + KS+            
Subjt:  SRFLAVKSLEHEIECKEALLRAKCLNLEGKAGMMNNGNSVWQEG-------EKPTGQSSLKT--------DIKACNGNKKHAGRTKSQCNAIFLLVFFRV

Query:  LLFSLFIFPFRHCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEE------------EERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYK
                  R  +RR+S R R+  ++  ENLFEIED++        ++            EE K  ++     F   R  + R LRR AE+I SYK
Subjt:  LLFSLFIFPFRHCVRRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEE------------EERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYK

AT5G04320.1 Shugoshin C terminus9.8e-1146.58Show/hide
Query:  MALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK
        M LMK +  RNK+++LSG E+QKLR +++ +Q +N  LAQ+NS+ LA        +K L+HE+ CK ALL+ K
Subjt:  MALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK

AT5G04320.1 Shugoshin C terminus1.3e-0231.94Show/hide
Query:  RRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE
        RRQS + ++Q  +  + +     +      + ++E E K+  + +E   + +R S+GRP R AAEK+QSY+E
Subjt:  RRQSGRFRNQVRDPEENLFEIEDVKFPATGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE

AT5G04320.2 Shugoshin C terminus9.4e-1442.71Show/hide
Query:  EYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK
        E +     L  +Q+   +L KENM LMK +  RNK+++LSG E+QKLR +++ +Q +N  LAQ+NS+ LA        +K L+HE+ CK ALL+ K
Subjt:  EYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLA--------VKSLEHEIECKEALLRAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAGACACCGTCAATTGGAAGCAGAGTGCGAAACAAGCTAGCAGATATTACGAATTCGAAATCAATCAAACCTCACGTGGAATATGAAAGTGCTTCGAAAACTTT
GCACCCAAATCAAGACGTCATCGATCAGCTGGTGAAGGAAAATATGGCTCTGATGAAACTTATCGTTGAGAGGAATAAAATTATTGACCTGAGTGGAGCAGAGTTGCAGA
AACTTCGGGCAAGTATTCAGAAACTGCAGCTTCAGAATTGGCATCTGGCTCAGTCAAACAGTCGCTTTTTAGCAGTCAAATCATTGGAGCATGAGATTGAATGCAAAGAG
GCCTTATTAAGAGCCAAGTGTTTGAATCTGGAGGGGAAAGCAGGGATGATGAATAATGGAAATTCTGTATGGCAGGAAGGAGAGAAGCCAACCGGGCAATCTTCACTTAA
AACTGACATCAAAGCTTGCAATGGAAATAAAAAGCACGCCGGAAGAACTAAAAGCCAATGTAACGCAATATTTCTACTAGTATTCTTCAGAGTTTTGTTGTTTTCCTTAT
TTATTTTTCCTTTCAGGCATTGTGTTAGAAGACAATCTGGTAGATTTAGGAATCAAGTGAGAGACCCTGAAGAGAACTTGTTTGAAATAGAAGACGTGAAATTTCCTGCT
ACTGGAAAAGAAGAAGAAGAAGAAGAGAGGAAGAACAATATTCAATTGGAAGAAGCTCCATTTCTGCCGCAACGATATTCAATTGGAAGACCATTACGCAGAGCAGCTGA
AAAGATTCAATCCTACAAAGAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAGACACCGTCAATTGGAAGCAGAGTGCGAAACAAGCTAGCAGATATTACGAATTCGAAATCAATCAAACCTCACGTGGAATATGAAAGTGCTTCGAAAACTTT
GCACCCAAATCAAGACGTCATCGATCAGCTGGTGAAGGAAAATATGGCTCTGATGAAACTTATCGTTGAGAGGAATAAAATTATTGACCTGAGTGGAGCAGAGTTGCAGA
AACTTCGGGCAAGTATTCAGAAACTGCAGCTTCAGAATTGGCATCTGGCTCAGTCAAACAGTCGCTTTTTAGCAGTCAAATCATTGGAGCATGAGATTGAATGCAAAGAG
GCCTTATTAAGAGCCAAGTGTTTGAATCTGGAGGGGAAAGCAGGGATGATGAATAATGGAAATTCTGTATGGCAGGAAGGAGAGAAGCCAACCGGGCAATCTTCACTTAA
AACTGACATCAAAGCTTGCAATGGAAATAAAAAGCACGCCGGAAGAACTAAAAGCCAATGTAACGCAATATTTCTACTAGTATTCTTCAGAGTTTTGTTGTTTTCCTTAT
TTATTTTTCCTTTCAGGCATTGTGTTAGAAGACAATCTGGTAGATTTAGGAATCAAGTGAGAGACCCTGAAGAGAACTTGTTTGAAATAGAAGACGTGAAATTTCCTGCT
ACTGGAAAAGAAGAAGAAGAAGAAGAGAGGAAGAACAATATTCAATTGGAAGAAGCTCCATTTCTGCCGCAACGATATTCAATTGGAAGACCATTACGCAGAGCAGCTGA
AAAGATTCAATCCTACAAAGAA
Protein sequenceShow/hide protein sequence
MAKTPSIGSRVRNKLADITNSKSIKPHVEYESASKTLHPNQDVIDQLVKENMALMKLIVERNKIIDLSGAELQKLRASIQKLQLQNWHLAQSNSRFLAVKSLEHEIECKE
ALLRAKCLNLEGKAGMMNNGNSVWQEGEKPTGQSSLKTDIKACNGNKKHAGRTKSQCNAIFLLVFFRVLLFSLFIFPFRHCVRRQSGRFRNQVRDPEENLFEIEDVKFPA
TGKEEEEEERKNNIQLEEAPFLPQRYSIGRPLRRAAEKIQSYKE