; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS006960 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006960
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description50S ribosomal protein L25
Genome locationscaffold196:239196..244034
RNA-Seq ExpressionMS006960
SyntenyMS006960
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0008097 - 5S rRNA binding (molecular function)
InterPro domainsIPR011035 - Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
IPR020056 - Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
IPR020057 - Ribosomal protein L25, beta domain
IPR029751 - Ribosomal protein L25
IPR037121 - Ribosomal protein L25, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147798.1 uncharacterized protein LOC111016648 [Momordica charantia]1.1e-14199.61Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ
        MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ

Query:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP
        IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP
Subjt:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP

Query:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
Subjt:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

XP_022950760.1 uncharacterized protein LOC111453766 [Cucurbita moschata]4.3e-13091.15Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT
        MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PRSISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV T
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT

Query:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL
        NQIRKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYL
Subjt:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL

Query:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        CPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SKDEPVCKIAGAR SDQQRKSK
Subjt:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

XP_022973342.1 uncharacterized protein LOC111471898 [Cucurbita maxima]8.7e-13191.15Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT
        MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPK+AETILA+PRSISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV T
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT

Query:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL
        NQ+RKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYL
Subjt:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL

Query:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        CPADI+PP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGAR SDQQRKSK
Subjt:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

XP_023538842.1 uncharacterized protein LOC111799648 [Cucurbita pepo subsp. pepo]9.6e-13090.77Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT
        MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PRSISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV T
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT

Query:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL
        NQIRKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYL
Subjt:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL

Query:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        CPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SKDEPVCKIAGAR SDQQ+KSK
Subjt:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

XP_038903089.1 50S ribosomal protein L25 [Benincasa hispida]8.1e-12991.09Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ
        MLRFYHSPTL+RV  LRRFSSAATA VLDS  EPP SYLE  P+PDPKYAETILA+PRSISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV TNQ
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ

Query:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP
        IRKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLH+GTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYLCP
Subjt:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP

Query:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        ADI+PPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGAR SDQQ+KSK
Subjt:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

TrEMBL top hitse value%identityAlignment
A0A1S3B7N9 50S ribosomal protein L255.1e-12185.5Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV
        MLRFYHSPTL+RVLL RRFSSAATA      LDS  EP FSYLE  P+PDPKYAETILA+PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISV
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV

Query:  PTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVK
         TNQI KLV +LGRSFFLSRLFDLEV  +FESG+I+EKVRVLPR+IHLHAGTDAPLN+TFIRAPSHA+LKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVK
Subjt:  PTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVK

Query:  YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL++SKDEPVCKIAGARVSDQQ+KSK
Subjt:  YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

A0A5D3DPH9 50S ribosomal protein L255.1e-12185.5Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV
        MLRFYHSPTL+RVLL RRFSSAATA      LDS  EP FSYLE  P+PDPKYAETILA+PRS SGK I AKERK GR PSI+FEQEDGQHGGNKRLISV
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATA----AVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISV

Query:  PTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVK
         TNQI KLV +LGRSFFLSRLFDLEV  +FESG+I+EKVRVLPR+IHLHAGTDAPLN+TFIRAPSHA+LKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVK
Subjt:  PTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVK

Query:  YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKL++SKDEPVCKIAGARVSDQQ+KSK
Subjt:  YLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

A0A6J1D2A7 uncharacterized protein LOC1110166485.3e-14299.61Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ
        MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQ

Query:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP
        IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP
Subjt:  IRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCP

Query:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
Subjt:  ADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

A0A6J1GGM6 uncharacterized protein LOC1114537662.1e-13091.15Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT
        MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPKYAETILA+PRSISGKNISAKERK GR PSIVFEQEDGQHGGNKRLISV T
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT

Query:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL
        NQIRKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYL
Subjt:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL

Query:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        CPADI+PPYIDVDLSELDVGQKLV GDLKVHPALKLL+SKDEPVCKIAGAR SDQQRKSK
Subjt:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

A0A6J1ICC4 uncharacterized protein LOC1114718984.2e-13191.15Show/hide
Query:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT
        MLRFYHSPTL+RVLLLRRFSSAATA    LDSDPEP FSYLE  P+PDPK+AETILA+PRSISGKNISAKERK GRTPSIVFEQEDGQHGGNKRLISV T
Subjt:  MLRFYHSPTLTRVLLLRRFSSAATAAV--LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPT

Query:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL
        NQ+RKLVNHLGRSFFLSRLFDLEVR EFESG+I+EKVRVLPRKIHLHAGTDAPLN+TFIRAPSHALLKVDVPL+FRGEDVCPGLRKGSYLNTIK+TVKYL
Subjt:  NQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYL

Query:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK
        CPADI+PP+IDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGAR SDQQRKSK
Subjt:  CPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK

SwissProt top hitse value%identityAlignment
B3Q7X4 50S ribosomal protein L251.1e-1930.27Show/hide
Query:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNI
        A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL+ +FD+ +          +K RV+PR  HL    D P+++
Subjt:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNI

Query:  TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD
         F+R  + A ++V VPL  +G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K +   D
Subjt:  TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD

Q219F9 50S ribosomal protein L259.9e-2132.62Show/hide
Query:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKR--LISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPL
        A  R   GK  +  ER+AGR P +++       G NK    ISV   ++R  +   GR  FL+ +FD+E+          +K RV+PR  HL    D P+
Subjt:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKR--LISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPL

Query:  NITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD
        ++ F+R    AL++V VPL  +  +  PG+++G  +N +  TV+    A+ IP +I+ D+S+LD+G  L + D+ +   +K L  +D
Subjt:  NITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD

Q2ISF7 50S ribosomal protein L256.4e-2032.62Show/hide
Query:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK--RLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPL
        A  R  SGK  +  ER+AGR P +++       G NK    ISV    +R  +   GR  FL+ +FD+ +          +K RV+PR  HL    D P+
Subjt:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK--RLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPL

Query:  NITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD
        ++ F+R    A +++ VPL  +G +  PG+++G   N +  TV    PAD IP +I+ D+S LD+G  L + D+ +   +K +  +D
Subjt:  NITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD

Q3SPM6 50S ribosomal protein L256.4e-2031.91Show/hide
Query:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK---RLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAP
        A  R  SGK  +  ER+AGR P++++        GNK   + ISV   ++R+ +   GR  FL+ +FD+ +          +K RV+PR  HL    D P
Subjt:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNK---RLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAP

Query:  LNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD
        +++ F+R    A ++V VPL     DV PG+++G  +N +   +   C A+ IP +I+ D+  L++   L + DL++ P +K L  +D
Subjt:  LNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD

Q6N1P8 50S ribosomal protein L251.1e-1930.27Show/hide
Query:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNI
        A  R  SGK  +  ER+AGR P +++       G N+  + +   + ++L   +    FL+ +FD+ +          +K RV+PR  HL    D P+++
Subjt:  AVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNI

Query:  TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD
         F+R  + A ++V VPL  +G +V PG+++G   N +  TV+   PA+ IP +I+ D+S LD+G  L + D+ +   +K +   D
Subjt:  TFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKD

Arabidopsis top hitse value%identityAlignment
AT4G23620.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain7.4e-10476.54Show/hide
Query:  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL
        LR FS AA AA+ LD   E   +YL   PRPDPK+AETILAVPRS+SGK+ISAKERKAGR PSI+FEQEDGQHGGNKRLISV TNQIRKLVNHLG SFFL
Subjt:  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL

Query:  SRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSE
        SRLFD+EVR E  S E+IEKVR LPR IHLH+GTDAPLN+TFIRAP  ALLKVD+PL+F G+DV PGL+KG+ LNTIK+TVK+LCPA+IIPPYI+VDLS+
Subjt:  SRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSE

Query:  LDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKS
        LD+GQKLVMGDLKVHPALKL++SKDEP+ K+AG RV+D Q+KS
Subjt:  LDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKS

AT4G23620.2 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain9.0e-10273.05Show/hide
Query:  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL
        LR FS AA AA+ LD   E   +YL   PRPDPK+AETILAVPRS+SGK+ISAKERKAGR PSI+FEQEDGQHGGNKRLISV TNQIRKLVNHLG SFFL
Subjt:  LRRFSSAATAAV-LDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGRSFFL

Query:  SRLFDLEVRPEFESGEIIEKVRVLPR-------------KIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPA
        SRLFD+EVR E  S E+IEKVR LPR             KIHLH+GTDAPLN+TFIRAP  ALLKVD+PL+F G+DV PGL+KG+ LNTIK+TVK+LCPA
Subjt:  SRLFDLEVRPEFESGEIIEKVRVLPR-------------KIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPA

Query:  DIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKS
        +IIPPYI+VDLS+LD+GQKLVMGDLKVHPALKL++SKDEP+ K+AG RV+D Q+KS
Subjt:  DIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKS

AT5G66860.1 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain4.4e-4043.35Show/hide
Query:  ETILAVPRSISGKNISAKERKAGRTPSIVFEQE----DGQHGG--NKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHL
        +TI A+PR  +G+ +SA++R  GR P++VF Q     D    G   K+L++    QI+ +++ +G  FF S  F L++R    S  ++E  RVLP K+H 
Subjt:  ETILAVPRSISGKNISAKERKAGRTPSIVFEQE----DGQHGG--NKRLISVPTNQIRKLVNHLGRSFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHL

Query:  HAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE--PV
           T   LN+ F+ A     LKVDVP++F+G D CPGL+KG  L TI+ T+K L PA+ IP  I+VD+S LD+  K+++ D+  HP+LKLL SK+E  PV
Subjt:  HAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQKLVMGDLKVHPALKLLQSKDE--PV

Query:  CKI
        CKI
Subjt:  CKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACGCTTCTACCACTCTCCCACTCTCACAAGAGTCCTCCTACTCCGCCGGTTTTCGTCGGCCGCCACCGCCGCCGTCCTCGATTCAGATCCCGAACCTCCATTTTC
GTACTTGGAGGATCTTCCAAGACCCGATCCCAAGTACGCCGAGACAATCCTCGCCGTTCCTCGCTCCATCTCCGGCAAGAACATTTCCGCCAAAGAGCGCAAGGCTGGCC
GTACTCCAAGCATTGTGTTCGAGCAAGAGGATGGCCAGCATGGCGGAAATAAGCGTCTCATATCAGTTCCCACCAATCAGATTAGGAAGCTTGTAAATCATCTCGGTCGC
TCCTTCTTCCTTTCCAGGCTTTTCGATCTTGAAGTTCGCCCCGAGTTTGAGTCCGGGGAGATTATCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTCCATGCGGG
AACTGATGCACCTCTTAATATTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTGATGTGCCTCTTATGTTCAGAGGAGAGGATGTATGTCCAGGATTGCGGA
AAGGATCTTATTTGAATACAATCAAGAAGACTGTTAAATACCTTTGTCCTGCCGATATCATTCCTCCATATATTGATGTCGATCTGAGTGAGTTAGATGTTGGCCAAAAG
TTGGTTATGGGTGACCTCAAGGTTCATCCTGCACTAAAGCTTCTTCAATCGAAGGATGAGCCTGTATGTAAGATCGCAGGAGCCAGAGTTTCTGACCAGCAAAGGAAATC
AAAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACGCTTCTACCACTCTCCCACTCTCACAAGAGTCCTCCTACTCCGCCGGTTTTCGTCGGCCGCCACCGCCGCCGTCCTCGATTCAGATCCCGAACCTCCATTTTC
GTACTTGGAGGATCTTCCAAGACCCGATCCCAAGTACGCCGAGACAATCCTCGCCGTTCCTCGCTCCATCTCCGGCAAGAACATTTCCGCCAAAGAGCGCAAGGCTGGCC
GTACTCCAAGCATTGTGTTCGAGCAAGAGGATGGCCAGCATGGCGGAAATAAGCGTCTCATATCAGTTCCCACCAATCAGATTAGGAAGCTTGTAAATCATCTCGGTCGC
TCCTTCTTCCTTTCCAGGCTTTTCGATCTTGAAGTTCGCCCCGAGTTTGAGTCCGGGGAGATTATCGAGAAGGTTCGGGTTTTACCTCGGAAGATTCATCTCCATGCGGG
AACTGATGCACCTCTTAATATTACTTTCATAAGGGCACCTTCACATGCTTTATTAAAAGTTGATGTGCCTCTTATGTTCAGAGGAGAGGATGTATGTCCAGGATTGCGGA
AAGGATCTTATTTGAATACAATCAAGAAGACTGTTAAATACCTTTGTCCTGCCGATATCATTCCTCCATATATTGATGTCGATCTGAGTGAGTTAGATGTTGGCCAAAAG
TTGGTTATGGGTGACCTCAAGGTTCATCCTGCACTAAAGCTTCTTCAATCGAAGGATGAGCCTGTATGTAAGATCGCAGGAGCCAGAGTTTCTGACCAGCAAAGGAAATC
AAAA
Protein sequenceShow/hide protein sequence
MLRFYHSPTLTRVLLLRRFSSAATAAVLDSDPEPPFSYLEDLPRPDPKYAETILAVPRSISGKNISAKERKAGRTPSIVFEQEDGQHGGNKRLISVPTNQIRKLVNHLGR
SFFLSRLFDLEVRPEFESGEIIEKVRVLPRKIHLHAGTDAPLNITFIRAPSHALLKVDVPLMFRGEDVCPGLRKGSYLNTIKKTVKYLCPADIIPPYIDVDLSELDVGQK
LVMGDLKVHPALKLLQSKDEPVCKIAGARVSDQQRKSK