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MS006987 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006987
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranspos_assoc domain-containing protein
Genome locationscaffold693:133822..133968
RNA-Seq ExpressionMS006987
SyntenyMS006987
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR029480 - Transposase-associated domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN78763.1 hypothetical protein VITISV_003315 [Vitis vinifera]7.4e-0747.92Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+  KTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
RVW48482.1 hypothetical protein CK203_103750 [Vitis vinifera]5.7e-0747.92Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y NG  +FI+VAKN+++K+GK+RCPC +C N     ++DIE HL+++
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
RVW68394.1 hypothetical protein CK203_061680 [Vitis vinifera]1.1e-0750Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+ GKTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
RVX11868.1 hypothetical protein CK203_009493 [Vitis vinifera]1.1e-0750Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+ GKTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
XP_008460612.1 PREDICTED: uncharacterized protein LOC103499390 [Cucumis melo]3.5e-0963.27Show/hide
Query:  SQYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        S+Y +G ++FIE+A N+LD+E  TRCPCSN LNV  N+LD IERHL+KY
Subjt:  SQYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
TrEMBL top hitse value%identityAlignment
A0A1S3CDA6 uncharacterized protein LOC1034993901.7e-0963.27Show/hide
Query:  SQYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        S+Y +G ++FIE+A N+LD+E  TRCPCSN LNV  N+LD IERHL+KY
Subjt:  SQYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
A0A438ELC1 Transpos_assoc domain-containing protein2.7e-0747.92Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y NG  +FI+VAKN+++K+GK+RCPC +C N     ++DIE HL+++
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
A0A438G8A3 Uncharacterized protein5.5e-0850Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+ GKTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
A0A438JSF3 Uncharacterized protein5.5e-0850Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+ GKTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
A5B8Q2 Uncharacterized protein3.6e-0747.92Show/hide
Query:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
        +Y+ G  +F++VAKN++D+  KTRCPC +C N     + DIE HL+KY
Subjt:  QYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGTCAATACTCTAACGGGGCCAGCAGTTTTATTGAAGTTGCTAAGAATTATTTGGATAAAGAAGGAAAAACGAGATGCCCTTGTTCGAACTGTTTAAATGTCCTTGGAAA
TAAATTGGATGATATAGAGCGTCACTTATTTAAATAT
mRNA sequenceShow/hide mRNA sequence
AGTCAATACTCTAACGGGGCCAGCAGTTTTATTGAAGTTGCTAAGAATTATTTGGATAAAGAAGGAAAAACGAGATGCCCTTGTTCGAACTGTTTAAATGTCCTTGGAAA
TAAATTGGATGATATAGAGCGTCACTTATTTAAATAT
Protein sequenceShow/hide protein sequence
SQYSNGASSFIEVAKNYLDKEGKTRCPCSNCLNVLGNKLDDIERHLFKY