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MS006993 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006993
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionORF40s
Genome locationscaffold693:233285..233468
RNA-Seq ExpressionMS006993
SyntenyMS006993
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFA98036.1 ribosomal protein S10 [Tanacetum cinerariifolium]9.7e-1792.31Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSL
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSS VMIAHSTKELYK HC SSL
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSL

KAA0060780.1 ORF40s [Cucumis melo var. makuwa]7.4e-2596.67Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELYK HCPSSLTRYCWIGL
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL

PPD93439.1 hypothetical protein GOBAR_DD09636 [Gossypium barbadense]9.0e-1589.8Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELY+   P
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP

PPE01242.1 hypothetical protein GOBAR_DD01736 [Gossypium barbadense]9.0e-1589.8Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELY+   P
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP

PPR89027.1 hypothetical protein GOBAR_AA31647 [Gossypium barbadense]9.0e-1589.8Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELY+   P
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP

TrEMBL top hitse value%identityAlignment
A0A0A9RWP6 Uncharacterized protein1.0e-1688.24Show/hide
Query:  KNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL
        +   PPRLTAA GTELAGASSSSPVMIAHSTKELYK HCPSSLTRYCWIGL
Subjt:  KNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL

A0A2P5WD91 Uncharacterized protein4.4e-1589.8Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELY+   P
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCP

A0A2T7C7G7 Uncharacterized protein8.3e-0696.15Show/hide
Query:  MIAHSTKELYKWHCPSSLTRYCWIGL
        MIAHSTKELYK HCPSSLTRYCWIGL
Subjt:  MIAHSTKELYKWHCPSSLTRYCWIGL

A0A446X8H3 Uncharacterized protein2.4e-1372.88Show/hide
Query:  CPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL
        C L     + T  P LTAA G ELA  SSSSPVMIAHSTKELYK HCPSSLTRYCWIGL
Subjt:  CPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL

A0A5A7V0C9 ORF40s3.6e-2596.67Show/hide
Query:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL
        TCPLRPVIPKNTCPPRLTAA GTELAGASSSSPVMIAHSTKELYK HCPSSLTRYCWIGL
Subjt:  TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGTTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGC
GCACTCGACGAAAGAGCTTTACAAGTGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTG
mRNA sequenceShow/hide mRNA sequence
ACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGTTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCCTGTCATGATCGC
GCACTCGACGAAAGAGCTTTACAAGTGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTG
Protein sequenceShow/hide protein sequence
TCPLRPVIPKNTCPPRLTAAVGTELAGASSSSPVMIAHSTKELYKWHCPSSLTRYCWIGL