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MS006995 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006995
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProlamin_like domain-containing protein
Genome locationscaffold693:265251..265635
RNA-Seq ExpressionMS006995
SyntenyMS006995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]4.3e-2246.34Show/hide
Query:  RRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGF
        R  ++++F    S L + S  D++Y +S IW+GW+D+DR  + L+ C+  +++ KC+VELY YYFN+S + +DLN CV VK +G+ CA+ FTFW+ FPG 
Subjt:  RRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGF

Query:  ETLKPIPMKLYKTCIKILAAPMP
        E  +P PMK+Y  CI  L AP P
Subjt:  ETLKPIPMKLYKTCIKILAAPMP

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]8.3e-1848.04Show/hide
Query:  DDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETLKPIPMKLYKTCIKILAAP
        DD+Y +S IWNGW+D+DR  S L+ C+ ++K+ KC+V+LY YYFN+S + +DL  CV VK +G++CA  F  W+ FPG E  +P PM +Y  C+  L A 
Subjt:  DDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETLKPIPMKLYKTCIKILAAP

Query:  MP
         P
Subjt:  MP

KAE8650019.1 hypothetical protein Csa_009940 [Cucumis sativus]1.7e-1858Show/hide
Query:  SSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARFTFWFSFPGFETLKPIPMKLY
        S AL   SI DDN + SSIW+GWIDKDR   IL  C+ ++K+DKC+VELY YYFN S + VDL+ CV V  +G  C A F  WFS  GF+ LKP PMKLY
Subjt:  SSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARFTFWFSFPGFETLKPIPMKLY

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1945Show/hide
Query:  IVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETL
        ++++     + L + S  DD+Y +S IW+ W+D+DR I+ L+ C+ ++K+ KC+VELY YYFN+S + +DLN CV VK +G+ CAR F  WF FP FE  
Subjt:  IVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETL

Query:  KPIPMKLYKTCIKILAAPMP
        +  PMK+YK C+  L A  P
Subjt:  KPIPMKLYKTCIKILAAPMP

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]1.8e-2046.21Show/hide
Query:  MTKMTRRAIVIIFES----KSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARF
        M   TR  +V++  S     S AL + S  DDN + SSIW+ W+D+DR    L  C+ +++++KC+VELY YYFN+S + +DL+ CV V  +G+ C A F
Subjt:  MTKMTRRAIVIIFES----KSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARF

Query:  TFWFSFPGFETLKPIPMKLYKTCIKILAAPMP
         FWFSFP  E LKP PMK+Y  C K L  P P
Subjt:  TFWFSFPGFETLKPIPMKLYKTCIKILAAPMP

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein1.0e-2144.09Show/hide
Query:  TKMTRRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFS
        T   R  ++++     + L + S  D++Y +SSIWN W+D+DR  + L+ C+  +++ KC+VELY YYFN+S + +DLN CV VK +G+ CA+ FTFW+ 
Subjt:  TKMTRRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFS

Query:  FPGFETLKPIPMKLYKTCIKILAAPMP
        FPG E  +P PMK+Y  C   L+AP P
Subjt:  FPGFETLKPIPMKLYKTCIKILAAPMP

A0A0A0KQ41 Prolamin_like domain-containing protein8.7e-2146.21Show/hide
Query:  MTKMTRRAIVIIFES----KSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARF
        M   TR  +V++  S     S AL + S  DDN + SSIW+ W+D+DR    L  C+ +++++KC+VELY YYFN+S + +DL+ CV V  +G+ C A F
Subjt:  MTKMTRRAIVIIFES----KSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARF

Query:  TFWFSFPGFETLKPIPMKLYKTCIKILAAPMP
         FWFSFP  E LKP PMK+Y  C K L  P P
Subjt:  TFWFSFPGFETLKPIPMKLYKTCIKILAAPMP

A0A0A0L535 Prolamin_like domain-containing protein7.8e-2256.25Show/hide
Query:  SSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARFTFWFSFPGFETLKPIPMKLY
        S AL   SI DDN + SSIW+GWIDKDR   IL  C+ ++K+DKC+VELY YYFN S + VDL+ CV V  +G  C A F  WFS  GF+ LKP PMKLY
Subjt:  SSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHC-ARFTFWFSFPGFETLKPIPMKLY

Query:  KTCIKILAAPMP
          C K L  P P
Subjt:  KTCIKILAAPMP

A0A5A7TZR1 Prolamin_like domain-containing protein4.0e-1848.04Show/hide
Query:  DDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETLKPIPMKLYKTCIKILAAP
        DD+Y +S IWNGW+D+DR  S L+ C+ ++K+ KC+V+LY YYFN+S + +DL  CV VK +G++CA  F  W+ FPG E  +P PM +Y  C+  L A 
Subjt:  DDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGFETLKPIPMKLYKTCIKILAAP

Query:  MP
         P
Subjt:  MP

A0A5D3C280 Prolamin_like domain-containing protein2.1e-2246.34Show/hide
Query:  RRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGF
        R  ++++F    S L + S  D++Y +S IW+GW+D+DR  + L+ C+  +++ KC+VELY YYFN+S + +DLN CV VK +G+ CA+ FTFW+ FPG 
Subjt:  RRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLS-RNVDLNYCVVVKALGRHCAR-FTFWFSFPGF

Query:  ETLKPIPMKLYKTCIKILAAPMP
        E  +P PMK+Y  CI  L AP P
Subjt:  ETLKPIPMKLYKTCIKILAAPMP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAAATGACTAGGAGAGCGATTGTTATAATATTTGAATCAAAATCATCAGCTTTAGACGAACATTCAATAGAAGATGACAACTACATGTCGTCATCGATATGGAA
TGGATGGATAGACAAAGATAGAGAGATCAGTATTCTAAAACTTTGTATAACTATAATAAAGAACGATAAATGTCGAGTGGAACTTTATAAATATTACTTCAATCTAAGTA
GAAATGTTGACCTAAACTACTGCGTAGTTGTCAAAGCCTTGGGTAGGCATTGTGCAAGGTTTACTTTTTGGTTCTCTTTTCCGGGGTTTGAAACCTTGAAGCCTATTCCA
ATGAAGCTTTACAAAACTTGTATTAAAATACTAGCTGCTCCAATGCCACTT
mRNA sequenceShow/hide mRNA sequence
ATGACAAAAATGACTAGGAGAGCGATTGTTATAATATTTGAATCAAAATCATCAGCTTTAGACGAACATTCAATAGAAGATGACAACTACATGTCGTCATCGATATGGAA
TGGATGGATAGACAAAGATAGAGAGATCAGTATTCTAAAACTTTGTATAACTATAATAAAGAACGATAAATGTCGAGTGGAACTTTATAAATATTACTTCAATCTAAGTA
GAAATGTTGACCTAAACTACTGCGTAGTTGTCAAAGCCTTGGGTAGGCATTGTGCAAGGTTTACTTTTTGGTTCTCTTTTCCGGGGTTTGAAACCTTGAAGCCTATTCCA
ATGAAGCTTTACAAAACTTGTATTAAAATACTAGCTGCTCCAATGCCACTT
Protein sequenceShow/hide protein sequence
MTKMTRRAIVIIFESKSSALDEHSIEDDNYMSSSIWNGWIDKDREISILKLCITIIKNDKCRVELYKYYFNLSRNVDLNYCVVVKALGRHCARFTFWFSFPGFETLKPIP
MKLYKTCIKILAAPMPL