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MS006996 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS006996
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProlamin_like domain-containing protein
Genome locationscaffold693:268028..268271
RNA-Seq ExpressionMS006996
SyntenyMS006996
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]1.5e-1749.45Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        +GW+DEDRG TL+PC+  M+S KCQVELY YYFN+ KKE+D   C+            FTFW+ F   E  +P  MK+Y +C+ RL AP P
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]1.2e-1446.15Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        NGW+DEDR S L+PC+ +MKS KCQV+LY YYFN+ KKE+D   C+            F  W+ F   E  +P  M +Y +CV RL A  P
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

KAG6575254.1 hypothetical protein SDJN03_25893, partial [Cucurbita argyrosperma subsp. sororia]1.8e-1344.94Show/hide
Query:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        W+DEDR   L+PC+ +MKS KCQV+LY  YFNL K+E+D   C+            F  WF++  FE  KP  MKLY+ C+ RL++  P
Subjt:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]7.2e-1549.45Show/hide
Query:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAA--PAP
        W+DEDRG  L+PC+ +MKS KCQVELY YYFN+ KKE+D   C+            F  WF F +FE  +   MK+Y++CV RL A  PAP
Subjt:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAA--PAP

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]1.4e-1852.81Show/hide
Query:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        W+DEDR  TL PC+ +M+S+KCQVELY YYFN+ KKE+D + C+            F FWFSF   E LKP  MK+Y +C KRL  PAP
Subjt:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein8.2e-1748.35Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        N W+DEDR  TL+PC+  M+S KCQVELY YYFN+ KKE+D   C+            FTFW+ F   E  +P  MK+Y +C  RL+AP P
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

A0A0A0KQ41 Prolamin_like domain-containing protein6.7e-1952.81Show/hide
Query:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        W+DEDR  TL PC+ +M+S+KCQVELY YYFN+ KKE+D + C+            F FWFSF   E LKP  MK+Y +C KRL  PAP
Subjt:  WIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

A0A0A0L535 Prolamin_like domain-containing protein2.6e-1853.85Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        +GWID+DR   L  C+ +MKSDKCQVELY YYFN  KKEVD + C+            F  WFS L F+ LKP  MKLY +C KRL  PAP
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

A0A5A7TZR1 Prolamin_like domain-containing protein5.9e-1546.15Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        NGW+DEDR S L+PC+ +MKS KCQV+LY YYFN+ KKE+D   C+            F  W+ F   E  +P  M +Y +CV RL A  P
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

A0A5D3C280 Prolamin_like domain-containing protein7.5e-1849.45Show/hide
Query:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP
        +GW+DEDRG TL+PC+  M+S KCQVELY YYFN+ KKE+D   C+            FTFW+ F   E  +P  MK+Y +C+ RL AP P
Subjt:  NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCI-----------RFTFWFSFLDFETLKPISMKLYESCVKRLAAPAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AATGGATGGATAGACGAAGATAGAGGGAGTACTCTAAAACCGTGTATAACTATAATGAAGAGTGACAAATGTCAAGTGGAACTTTATAAATATTACTTCAATCTAATCAA
GAAAGAGGTGGATCAGGCGTTGTGCATAAGGTTTACTTTTTGGTTCTCTTTTCTGGACTTTGAAACCTTAAAGCCTATTTCGATGAAGCTTTACGAGAGTTGTGTTAAAA
GACTAGCTGCTCCTGCACCCATG
mRNA sequenceShow/hide mRNA sequence
AATGGATGGATAGACGAAGATAGAGGGAGTACTCTAAAACCGTGTATAACTATAATGAAGAGTGACAAATGTCAAGTGGAACTTTATAAATATTACTTCAATCTAATCAA
GAAAGAGGTGGATCAGGCGTTGTGCATAAGGTTTACTTTTTGGTTCTCTTTTCTGGACTTTGAAACCTTAAAGCCTATTTCGATGAAGCTTTACGAGAGTTGTGTTAAAA
GACTAGCTGCTCCTGCACCCATG
Protein sequenceShow/hide protein sequence
NGWIDEDRGSTLKPCITIMKSDKCQVELYKYYFNLIKKEVDQALCIRFTFWFSFLDFETLKPISMKLYESCVKRLAAPAPM