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MS007032 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007032
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionWD repeat-containing protein 48
Genome locationscaffold85:138880..138978
RNA-Seq ExpressionMS007032
SyntenyMS007032
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33906.1 nucleotide binding protein [Cucumis melo subsp. melo]1.5e-0893.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
KAA0063633.1 WD repeat-containing protein 48 [Cucumis melo var. makuwa]1.5e-0893.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
TYK18393.1 WD repeat-containing protein 48 [Cucumis melo var. makuwa]1.5e-0893.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
XP_004139215.1 WD repeat-containing protein 48 [Cucumis sativus]1.5e-0893.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
XP_022143051.1 WD repeat-containing protein 48 [Momordica charantia]2.4e-09100Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
TrEMBL top hitse value%identityAlignment
A0A0A0LJF0 WD_REPEATS_REGION domain-containing protein7.5e-0993.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
A0A5A7V6A0 WD repeat-containing protein 487.5e-0993.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
A0A5D3D4C5 WD repeat-containing protein 487.5e-0993.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
A0A6J1CP19 WD repeat-containing protein 481.2e-09100Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
E5GBR4 Nucleotide binding protein7.5e-0993.94Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVRNYIWKKPEDLVLNY+VVQ R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05090.1 Transducin/WD40 repeat-like superfamily protein3.9e-1078.79Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVR Y+WKKPEDL+LNY+V  +R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
AT3G05090.2 Transducin/WD40 repeat-like superfamily protein3.9e-1078.79Show/hide
Query:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR
        QVLSPDMSLATVR Y+WKKPEDL+LNY+V  +R
Subjt:  QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAGGTCTTGTCTCCTGATATGAGCTTAGCCACAGTTAGGAATTACATCTGGAAGAAGCCAGAGGATTTGGTCCTCAATTATAAAGTGGTTCAAAGCAGG
mRNA sequenceShow/hide mRNA sequence
CAGGTCTTGTCTCCTGATATGAGCTTAGCCACAGTTAGGAATTACATCTGGAAGAAGCCAGAGGATTTGGTCCTCAATTATAAAGTGGTTCAAAGCAGG
Protein sequenceShow/hide protein sequence
QVLSPDMSLATVRNYIWKKPEDLVLNYKVVQSR