; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007036 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007036
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold430:4398..4784
RNA-Seq ExpressionMS007036
SyntenyMS007036
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
OMO77077.1 Glycoside hydrolase, family 47 [Corchorus capsularis]2.9e-1836.43Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        + +N+  KI  RC   C  R++AS  +DE T QIK+ Y  H+C+R+      TA +LAE YF+        + + +V  + ++  +++S  Q YRA++ A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
           ++G I++QY KLWDYCE ++ +NP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

XP_022156713.1 uncharacterized protein LOC111023558 [Momordica charantia]1.4e-2553.49Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        YQKNEP ++ VRCQDGCN RLHASNRQDEY                                                LVRKDFNINISRHQAYRARKIA
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        M KL+GT+E+QYAKL DYCEEL RSNP+S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

XP_028052320.1 uncharacterized protein LOC114256842 [Camellia sinensis]4.9e-1841.86Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        + K+E  K+ V C DGC  RL+ASN   E T QIK+   TH+C R   ++  T+++LA  Y + F            D V+ D  + IS+ + YRARK A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        + +L GT   QY KLWDY  EL R+NP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

XP_030487370.1 uncharacterized protein LOC115704296 [Cannabis sativa]8.1e-2142.64Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        + KN+  +I V CQ+ C    +AS  +D+   QIK L   H C R   NK   A WLAE Y + F ++        +D V+ DF   +SR + YR R  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        M+ ++G I+ QYA LWDYCEEL+RSNP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

XP_030502279.1 uncharacterized protein LOC115717429 [Cannabis sativa]2.4e-2042.64Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        + KN+  +I V CQ+ C    +AS  +D+   QIK L   H C R   NK   A WLAE Y +IF ++        +D V+ DF   +SR + YR R  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        M+ ++G I+ QYA LWDYCEEL+RSN  S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

TrEMBL top hitse value%identityAlignment
A0A2N9EJP6 SWIM-type domain-containing protein4.8e-1938.76Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        ++KN+  ++ V+C+DGC   L+    ++E T Q+K+L   H+C ++  N+ A+++WL +H  D   +   M    +   V   F ++ISRHQA RA+  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
           ++GT + QYA+L DYCEEL RSNP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

A0A2N9H0N6 SWIM-type domain-containing protein4.8e-1938.76Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        ++KN+  ++ V+C+DGC   L+    ++E T Q+K+L   H+C ++  N+ A+++WL +H  D   +   M    +   V   F ++ISRHQA RA+  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
           ++GT + QYA+L DYCEEL RSNP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

A0A2N9HQC3 SWIM-type domain-containing protein4.8e-1938.76Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        ++KN+  ++ V+C+DGC   L+    ++E T Q+K+L   H+C ++  N+ A+++WL +H  D   +   M    +   V   F ++ISRHQA RA+  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
           ++GT + QYA+L DYCEEL RSNP S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

A0A6J1DRD2 uncharacterized protein LOC1110235586.9e-2653.49Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        YQKNEP ++ VRCQDGCN RLHASNRQDEY                                                LVRKDFNINISRHQAYRARKIA
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        M KL+GT+E+QYAKL DYCEEL RSNP+S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

A0A803NF79 Uncharacterized protein1.1e-2042.64Show/hide
Query:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA
        + KN+  +I V CQ+ C    +AS  +D+   QIK L   H C R   NK   A WLAE Y +IF ++        +D V+ DF   +SR + YR R  A
Subjt:  YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIA

Query:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS
        M+ ++G I+ QYA LWDYCEEL+RSN  S
Subjt:  MRKLKGTIEIQYAKLWDYCEELRRSNPNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TACCAGAAAAATGAACCTGGAAAGATTATAGTGAGATGTCAAGATGGGTGCAATTTGAGGTTGCATGCCTCTAACAGACAAGATGAATATACGAACCAAATTAAGTCATT
ATATAGTACACACTCCTGCGCTAGAAAGACAACCAATAAGCATGCAACGGCTAGTTGGCTTGCTGAGCACTACTTTGACATATTTATGGCTCAACTATACATGGATTGGA
AAGCAATGGTAGATCTTGTGAGGAAGGACTTTAATATTAACATCTCAAGGCATCAAGCATATAGAGCAAGGAAGATTGCGATGCGTAAGCTTAAAGGCACAATTGAGATA
CAATATGCCAAGCTATGGGATTACTGTGAGGAATTGAGGAGATCTAATCCGAATAGT
mRNA sequenceShow/hide mRNA sequence
TACCAGAAAAATGAACCTGGAAAGATTATAGTGAGATGTCAAGATGGGTGCAATTTGAGGTTGCATGCCTCTAACAGACAAGATGAATATACGAACCAAATTAAGTCATT
ATATAGTACACACTCCTGCGCTAGAAAGACAACCAATAAGCATGCAACGGCTAGTTGGCTTGCTGAGCACTACTTTGACATATTTATGGCTCAACTATACATGGATTGGA
AAGCAATGGTAGATCTTGTGAGGAAGGACTTTAATATTAACATCTCAAGGCATCAAGCATATAGAGCAAGGAAGATTGCGATGCGTAAGCTTAAAGGCACAATTGAGATA
CAATATGCCAAGCTATGGGATTACTGTGAGGAATTGAGGAGATCTAATCCGAATAGT
Protein sequenceShow/hide protein sequence
YQKNEPGKIIVRCQDGCNLRLHASNRQDEYTNQIKSLYSTHSCARKTTNKHATASWLAEHYFDIFMAQLYMDWKAMVDLVRKDFNINISRHQAYRARKIAMRKLKGTIEI
QYAKLWDYCEELRRSNPNS