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MS007037 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007037
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMaturase
Genome locationscaffold430:11112..11438
RNA-Seq ExpressionMS007037
SyntenyMS007037
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0007005 - mitochondrion organization (biological process)
GO:0009845 - seed germination (biological process)
GO:0032885 - regulation of polysaccharide biosynthetic process (biological process)
GO:0090615 - mitochondrial mRNA processing (biological process)
GO:1900864 - mitochondrial RNA modification (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR024937 - Domain X


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022970633.1 uncharacterized protein LOC111469563 [Cucurbita maxima]9.8e-5293.58Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRG+ISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSA+NII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

YP_003587246.1 maturase, partial [Citrullus lanatus]9.8e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNW AGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

YP_003587362.1 maturase [Cucurbita pepo]4.4e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNW AGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSA+NIILKYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

YP_004849345.1 maturase, partial [Cucumis sativus]9.8e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVR IVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

YP_009913627.1 maturase [Luffa acutangula]2.0e-5295.41Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

TrEMBL top hitse value%identityAlignment
A0A6J1I4G9 uncharacterized protein LOC1114695634.8e-5293.58Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRG+ISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSA+NII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

A0A7D6C8J7 Maturase9.6e-5395.41Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

D5I3B6 Maturase (Fragment)4.8e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNW AGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

D5I3E8 Maturase2.1e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNW AGIAISLLSYYRCCDNLYQVRTIVDHQIRW AIFTLAHKHKSSA+NIILKYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

G3EIZ7 Maturase (Fragment)4.8e-5294.5Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        IHLEA IKKILRRLRDRGIISRRRPWPIHVA LTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVR IVDHQIRW AIFTLAHKHKSSARNII KYS+DP
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGGQ
Subjt:  NIVNQEGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74350.1 Intron maturase, type II family protein4.8e-0428.05Show/hide
Query:  ASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHK
        A    I RRL   G+I+  + +    + L  +    I++W +G+    + +Y  C N  +++ ++D+QIR   I TLA K++
Subjt:  ASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHK

AT5G04050.1 RNA-directed DNA polymerase (reverse transcriptase)8.1e-0427.27Show/hide
Query:  EASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIV
        E  ++K ++ +     + R RP    + +L  + D DI+ W AG+    L ++ CC N   V+++V
Subjt:  EASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIV

ATMG00520.1 Intron maturase, type II family protein1.2e-5088.99Show/hide
Query:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP
        I +EA IKKILRRLRDRGIISRRRPWPIHVA LTNVSD DIVNWSAGIAIS LSYYRC DNLYQVRTIVDHQIRW AIFTLAHKHKSSA NIILKYS+D 
Subjt:  IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDP

Query:  NIVNQEGGQ
        NIVNQEGG+
Subjt:  NIVNQEGGQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATACATCTCGAGGCGTCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGTCGAAGAAGACCCTGGCCAATCCACGTGGCCTACTTGACGAACGTCAG
CGACGGAGACATCGTAAATTGGTCCGCGGGCATCGCAATAAGTCTTCTGTCCTACTACAGGTGCTGCGACAACCTTTACCAAGTCCGAACGATTGTCGACCACCAGATCC
GCTGGCCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCTAAAGTACTCCGAAGACCCAAATATAGTAAATCAAGAAGGTGGTCAA
mRNA sequenceShow/hide mRNA sequence
ATACATCTCGAGGCGTCTATCAAAAAGATACTCCGAAGGCTTCGGGATCGAGGTATCATTAGTCGAAGAAGACCCTGGCCAATCCACGTGGCCTACTTGACGAACGTCAG
CGACGGAGACATCGTAAATTGGTCCGCGGGCATCGCAATAAGTCTTCTGTCCTACTACAGGTGCTGCGACAACCTTTACCAAGTCCGAACGATTGTCGACCACCAGATCC
GCTGGCCTGCAATATTCACCCTAGCCCACAAGCACAAATCCTCGGCGCGGAATATAATCCTAAAGTACTCCGAAGACCCAAATATAGTAAATCAAGAAGGTGGTCAA
Protein sequenceShow/hide protein sequence
IHLEASIKKILRRLRDRGIISRRRPWPIHVAYLTNVSDGDIVNWSAGIAISLLSYYRCCDNLYQVRTIVDHQIRWPAIFTLAHKHKSSARNIILKYSEDPNIVNQEGGQ