; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007040 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007040
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold430:23088..23285
RNA-Seq ExpressionMS007040
SyntenyMS007040
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA7056903.1 unnamed protein product [Microthlaspi erraticum]1.5e-1051.52Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        G+ F D+  FN+ALLAKQ W ++  P+ LVA++LK  Y P SS LSA VGS  SY W+ +VW  +L
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
XP_022131662.1 uncharacterized protein LOC111004787 [Momordica charantia]1.5e-1053.03Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GLNF DLE FN+AL+AKQ+W  +  P+ LV++VLK  Y  DS +L A    N SYFW+G +W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]3.0e-1148.48Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        G+ F DLE FNKALLAKQ W  +N P+ ++++VLKG Y  D S + A++  N SY W+ ++W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]7.9e-1254.55Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GLNF DLE FN+AL+AK +W ++  P+ LV++VLK  Y  D+SLL A   S SSYFW+G +W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
XP_030507371.1 uncharacterized protein LOC115722322 [Cannabis sativa]2.5e-1053.03Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GL F DLE FNKALLAKQ+W  +  P  LV +VLK  Y   SS+L A+ GS SS  W+GL+W  ++
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
TrEMBL top hitse value%identityAlignment
A0A6D2KWQ7 Reverse transcriptase domain-containing protein7.2e-1151.52Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        G+ F D+  FN+ALLAKQ W ++  P+ LVA++LK  Y P SS LSA VGS  SY W+ +VW  +L
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
A0A6J1BRN0 uncharacterized protein LOC1110047877.2e-1153.03Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GLNF DLE FN+AL+AKQ+W  +  P+ LV++VLK  Y  DS +L A    N SYFW+G +W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
A0A6J1DAR4 uncharacterized protein LOC1110189541.4e-1148.48Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        G+ F DLE FNKALLAKQ W  +N P+ ++++VLKG Y  D S + A++  N SY W+ ++W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
A0A6J1DX30 uncharacterized protein LOC1110248743.8e-1254.55Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GLNF DLE FN+AL+AK +W ++  P+ LV++VLK  Y  D+SLL A   S SSYFW+G +W  DL
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
A0A803QJV0 Uncharacterized protein7.2e-1148.48Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GL F DLE FN+ALLAKQ+W  + QP  L  +VLK  Y P+ S+L+A+ G+++S+ W+ LVW  ++
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.8e-0942.42Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GL F DL  FN+ALLAKQ +  I+QP  L++++L+  Y P SS++   VG+  SY W+ ++   +L
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein1.8e-0939.39Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        G+ F D+E FN ALL KQ+W  +++P  L+A+V K  Y   S  L+A +GS  S+ W+ +  S ++
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-1042.42Show/hide
Query:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL
        GL F DL  FN+ALLAKQ +  I+QP  L++++L+  Y P SS++   VG+  SY W+ ++   +L
Subjt:  GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTCTTAATTTCGGTGATTTGGAAACTTTCAACAAGGCCCTCCTCGCAAAACAGTTGTGGCATTACATCAATCAACCTTCCCGGTTGGTTGCTCAGGTTCTCAAGGGTAT
TTATGCTCCCGATTCATCACTCCTTTCCGCAGAGGTGGGTTCAAATTCTTCTTATTTTTGGCAAGGTTTGGTATGGAGTATGGATCTT
mRNA sequenceShow/hide mRNA sequence
GGTCTTAATTTCGGTGATTTGGAAACTTTCAACAAGGCCCTCCTCGCAAAACAGTTGTGGCATTACATCAATCAACCTTCCCGGTTGGTTGCTCAGGTTCTCAAGGGTAT
TTATGCTCCCGATTCATCACTCCTTTCCGCAGAGGTGGGTTCAAATTCTTCTTATTTTTGGCAAGGTTTGGTATGGAGTATGGATCTT
Protein sequenceShow/hide protein sequence
GLNFGDLETFNKALLAKQLWHYINQPSRLVAQVLKGIYAPDSSLLSAEVGSNSSYFWQGLVWSMDL