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MS007048 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007048
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTransposon TX1 uncharacterized 149 kDa protein
Genome locationscaffold430:107853..108041
RNA-Seq ExpressionMS007048
SyntenyMS007048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648478.1 hypothetical protein Csa_008296, partial [Cucumis sativus]1.9e-0750Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNS
        QKCKL+WLK GDEN+ FF R+LAA+KR + I E+ D+Q T +V+    E+ I+ F+++LY +
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNS

XP_031097151.1 uncharacterized protein LOC116001411 [Ipomoea triloba]7.3e-0744.44Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        QK ++ WL+EGD N+KFFH  +  R R+ +I  IK+ + T L ++ +I+TE + FF NLY +E
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE

XP_038884535.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X1 [Benincasa hispida]5.0e-0856.67Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY
        QK KL+WL  GDEN+ FFHR+LAA++RK  I E+ +EQ     + REIET I+ FF NLY
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY

XP_038884536.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X2 [Benincasa hispida]5.0e-0856.67Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY
        QK KL+WL  GDEN+ FFHR+LAA++RK  I E+ +EQ     + REIET I+ FF NLY
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY

XP_038884537.1 DEAD-box ATP-dependent RNA helicase FANCM isoform X3 [Benincasa hispida]5.0e-0856.67Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY
        QK KL+WL  GDEN+ FFHR+LAA++RK  I E+ +EQ     + REIET I+ FF NLY
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY

TrEMBL top hitse value%identityAlignment
A0A151RAJ1 Transposon TX1 uncharacterized6.7e-0641.27Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        Q+ K+HWLKEGD NSKFFH   +AR+++  I  I +E+  ++ N+ +IE     +FE L+  +
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE

A0A484L3U0 Reverse transcriptase domain-containing protein3.9e-0644.44Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        QK  + WLKEGD NSKF+H Y+  R+ K  I  +KDE    ++N+ EI    +  F  LY+SE
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE

A0A5D3C5A3 Uncharacterized protein6.0e-0751.67Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY
        Q  KLHWLK GDENS FFHR+L+A+KRK  I E+ D+   +  +  EIE  I+ F+++LY
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLY

A0A803P465 Uncharacterized protein6.7e-0650Show/hide
Query:  KCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        K K  W KEGD NS+FFH  L ARK +  I  I+ E  + L  K EI  EI+ FF +LY SE
Subjt:  KCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE

A0A803QGT5 Uncharacterized protein5.1e-0648.39Show/hide
Query:  KCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        K K  W+KEGD NS+FFH  L ARK K  I  I+ E  T L  + +I +E++ FF  LY SE
Subjt:  KCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.8e-0426.98Show/hide
Query:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE
        QK ++ WL++GD N++FFH+ + A + K  I  ++ + +  + N  +++  I+ ++ +L  S+
Subjt:  QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CAAAAATGTAAACTCCATTGGCTTAAAGAAGGTGATGAAAACAGTAAGTTCTTTCATAGATACTTGGCTGCCCGTAAAAGAAAAGCACAGATTTGTGAAATTAAAGATGA
GCAGAATACCTCGCTAGTGAATAAAAGGGAAATTGAAACTGAAATCATGAGGTTTTTCGAGAATTTATACAATAGTGAA
mRNA sequenceShow/hide mRNA sequence
CAAAAATGTAAACTCCATTGGCTTAAAGAAGGTGATGAAAACAGTAAGTTCTTTCATAGATACTTGGCTGCCCGTAAAAGAAAAGCACAGATTTGTGAAATTAAAGATGA
GCAGAATACCTCGCTAGTGAATAAAAGGGAAATTGAAACTGAAATCATGAGGTTTTTCGAGAATTTATACAATAGTGAA
Protein sequenceShow/hide protein sequence
QKCKLHWLKEGDENSKFFHRYLAARKRKAQICEIKDEQNTSLVNKREIETEIMRFFENLYNSE