; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007052 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007052
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold430:153831..160358
RNA-Seq ExpressionMS007052
SyntenyMS007052
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR007529 - Zinc finger, HIT-type
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606180.1 putative ATP-dependent RNA helicase DDX59, partial [Cucurbita argyrosperma subsp. sororia]4.2e-20179.86Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  REPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLV YESDESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR EESS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETKHILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           +AGHLNEHI  HPTHGLYYSHKLKRLVKCCKSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G G+SIISGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN + +KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

KAG7036125.1 putative ATP-dependent RNA helicase DDX59 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-20180.09Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISY KDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  REPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLV YESDESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR EESS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETKHILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           +AGHLNEHI  HPTHGLYYSHKLKRLVKCCKSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN + +KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

XP_022154829.1 uncharacterized protein LOC111021991 [Momordica charantia]6.1e-23291.97Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL

Query:  MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN
        MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN
Subjt:  MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN

Query:  SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-----------------
        SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK                 
Subjt:  SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-----------------

Query:  ------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF
                          SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF
Subjt:  ------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF

Query:  TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
Subjt:  TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

XP_022996224.1 uncharacterized protein LOC111491515 isoform X1 [Cucurbita maxima]2.5e-20180.32Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QP PV KKNENRKR  RE ELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLVGYESDESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR EESS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           SAGHLNEHIH HPTHGLYYSHKLKRLVKCCKSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN +  KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

XP_023532353.1 uncharacterized protein LOC111794552 isoform X1 [Cucurbita pepo subsp. pepo]3.6e-20079.41Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QPPPV KKNENRKR  REPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLVGYESDESTSSE+AVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR E SS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLA DCLV+TSNQVMQQKT+N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           +AGHLNEHI  HPTHGLYYSHKLKRLVKCCKSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSI+SGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN + +KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

TrEMBL top hitse value%identityAlignment
A0A0A0KP93 CCHC-type domain-containing protein1.5e-19177.27Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDL+LSSALQNLRAYNIATGNAP T+ Q    P PVVKKNENRKR REPEL     YDVG SDGPMSHQDYIERRRKEANKSQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQP

Query:  YEILMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRRE
        YE L EDVL  SSSGLNLV YESDES SS+ A K D QNSS LN+++E++SK EQ FA+AGEPVCVVCGRYGEYIC+ETNDDICSMECK KLLEILKR E
Subjt:  YEILMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRRE

Query:  ESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-------------
        E  N EVKDVALPE+K+ILPSPEF EDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQ MQQ T N +PGDLLGLYK             
Subjt:  ESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-------------

Query:  ----------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICC
                              SAGHLNEHIH HPTHGLYYSHKLKRLVKCCKSTC+VT IKDLLVCHYCF+KAFDKFYDMYTA+W   GLSIISGSICC
Subjt:  ----------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICC

Query:  EDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        EDHF WHRMNCFNADVED AYIINR  +KDK +SISDFIF
Subjt:  EDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

A0A1S3ATQ8 uncharacterized protein LOC1034826176.6e-19277.5Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQP
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAP T+ Q    P PV KKNE RKR REPEL    KYDVG SDGPMSHQDYIERRRKEAN SQP
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQ----PPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQP

Query:  YEILMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRRE
        YE L EDVL  SSSGLNLV YESDES SS+ AVK D QNSS LN++EE+KSK EQ FA+AGEPVCVVCGRYGEYIC+ETNDDICS ECK KLLEILKR E
Subjt:  YEILMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRRE

Query:  ESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-------------
        E SN EVKDVALPE+K+ILPSPE  EDTWDYKNHRWSKKKS+LCTYECWKCQKPGHLAEDCLVKTSNQVMQQ T N +PGDLLGLYK             
Subjt:  ESSNSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-------------

Query:  ----------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICC
                              SAGHLN+HIH HPTHGLYYSHKLKRLVKCCKSTC+VT IKDLLVCHYCF+KAFDKFYDMYTA+W   GLSIISGSICC
Subjt:  ----------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICC

Query:  EDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        EDHF WHRMNCFNADVED AYIINR  +KDKS+SISDFIF
Subjt:  EDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

A0A6J1DNB9 uncharacterized protein LOC1110219912.9e-23291.97Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEIL

Query:  MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN
        MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN
Subjt:  MEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSN

Query:  SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-----------------
        SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK                 
Subjt:  SEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK-----------------

Query:  ------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF
                          SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF
Subjt:  ------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHF

Query:  TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
Subjt:  TWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

A0A6J1H0R9 uncharacterized protein LOC111459101 isoform X12.1e-19878.72Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T+++PPPV KKNENRKR  REPELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLVGYES ESTSSES VK DHQNSS LNEFEE++ K EQ FA AGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR EESS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCLV++SNQVMQQK++N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           +AGHLNEHI  HPTHGLYYSHKLKRLVKCCKSTC+VT+IKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN + +KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

A0A6J1K849 uncharacterized protein LOC111491515 isoform X11.2e-20180.32Show/hide
Query:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI
        MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIA GNAP T++QP PV KKNENRKR  RE ELS NPKYDVG SDGPMSHQDYIE+RRKEAN+ QPYE 
Subjt:  MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKR-HREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEI

Query:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        L EDVLGTSS GLNLVGYESDESTSSESAVK DHQNSS LNEFEE++ K EQ FAIAGEPVCVVCGRYGEYICNETNDDICSMECK KLLEILKR EESS
Subjt:  LMEDVLGTSSSGLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Query:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------
        N EVKDVALPETK+ILPSPEF EDTWDYKNHRWSK KSNLCTYECWKCQKPGHLAEDCLV+TSNQVMQQKT+N +P DL+GLYK                
Subjt:  NSEVKDVALPETKHILPSPEFEEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYK----------------

Query:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH
                           SAGHLNEHIH HPTHGLYYSHKLKRLVKCCKSTC+VTDIKDLLVCHYCF+KAFDKFYDMYTA+W G GLSIISGSICCEDH
Subjt:  -------------------SAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHYCFNKAFDKFYDMYTATWKGVGLSIISGSICCEDH

Query:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF
        F WHRMNCFNADVED AYI+NRN +  KS S+SDFIF
Subjt:  FTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF

SwissProt top hitse value%identityAlignment
Q0E2Z7 DEAD-box ATP-dependent RNA helicase 414.5e-1249.4Show/hide
Query:  DHQNSSPLNEFE-EIKSKNEQCF----AIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSNSEVKDVALP
        DH ++ P N  E E  S  E+CF    A+ GEP CV+CGRYGEYIC++T+DDICS+ECK  LL  L           K V LP
Subjt:  DHQNSSPLNEFE-EIKSKNEQCF----AIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSNSEVKDVALP

Q3EBD3 DEAD-box ATP-dependent RNA helicase 417.2e-1060.87Show/hide
Query:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL
        +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL

Q5T1V6 Probable ATP-dependent RNA helicase DDX599.1e-1347.44Show/hide
Query:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS
        S S E   K  H +  P+  F +      Q +A  GEP+CVVCGRYGEYIC++T++D+CS+ECK K L  +K +EE S
Subjt:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESS

Q66HG7 Probable ATP-dependent RNA helicase DDX591.7e-1146.75Show/hide
Query:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREES
        ST  +  VK  H +  P+  F + +   E      GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S
Subjt:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREES

Q9DBN9 Probable ATP-dependent RNA helicase DDX592.9e-1143.48Show/hide
Query:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREES--SNSEVKDVALPET
        ST  +  VK  H +  P+  F + +   E      GEPVCVVCGRYGEYIC++T++D+CS+ECK K L  +K  E S   +S  +  A PE+
Subjt:  STSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREES--SNSEVKDVALPET

Arabidopsis top hitse value%identityAlignment
AT3G02065.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.1e-1160.87Show/hide
Query:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL
        +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL

AT3G02065.3 P-loop containing nucleoside triphosphate hydrolases superfamily protein5.1e-1160.87Show/hide
Query:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL
        +K K+ +Q   ++GEP CV+C RYGEYIC+ETNDD+CS+ECK  LL
Subjt:  IKSKN-EQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCAGTAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGATTTGAATCTCTCCTCCGCTCTTCAGAACCTAAGAGCATATAATATTGCTACCGGTAA
TGCTCCTCTGACCGAAGAACAACCACCTCCCGTCGTGAAGAAGAATGAGAACCGGAAACGCCACCGGGAGCCAGAATTGTCAAGTAATCCAAAATATGATGTTGGGTACA
GTGACGGACCTATGTCACATCAAGATTATATTGAGAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTACGAGATCCTTATGGAAGATGTTTTGGGAACTTCCAGCTCG
GGCTTGAACTTGGTAGGATATGAAAGTGATGAGAGCACGTCTTCAGAAAGTGCAGTAAAGCAAGATCATCAAAATTCCAGTCCCTTGAATGAATTTGAGGAAATTAAGAG
CAAAAACGAGCAATGCTTCGCCATTGCAGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATGCAATGAAACAAATGATGACATCTGCAGCATGGAGT
GCAAATTGAAGCTTTTGGAAATTCTTAAACGGAGGGAGGAGTCTTCAAACAGTGAAGTGAAAGATGTTGCATTACCAGAAACTAAGCATATCTTGCCTTCCCCAGAGTTT
GAGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGCTGGAAATGTCAGAAGCCAGGACACCTTGCTGAAGATTG
TTTGGTTAAAACCAGTAACCAGGTAATGCAACAAAAGACTTACAATATTATACCCGGCGATCTCCTTGGACTGTACAAAAGTGCAGGTCATTTAAATGAGCATATCCACG
CACACCCAACTCATGGATTATATTACTCGCATAAACTCAAACGTCTTGTAAAATGTTGCAAATCAACATGCAAGGTGACTGACATTAAGGATCTTCTGGTGTGTCATTAC
TGTTTCAATAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAACTTGGAAGGGAGTTGGACTCTCAATCATATCAGGTTCCATTTGCTGCGAAGATCACTTCACGTG
GCATCGGATGAACTGTTTCAACGCGGATGTTGAGGACAACGCCTATATCATCAATAGGAATGCTCAAAAAGATAAGTCCATTTCCATTAGTGATTTCATTTTC
mRNA sequenceShow/hide mRNA sequence
ATGGGCAGTAGAACAAATTTCTACAAGAATCCTTCCATCTCCTACAAGAAGGATTTGAATCTCTCCTCCGCTCTTCAGAACCTAAGAGCATATAATATTGCTACCGGTAA
TGCTCCTCTGACCGAAGAACAACCACCTCCCGTCGTGAAGAAGAATGAGAACCGGAAACGCCACCGGGAGCCAGAATTGTCAAGTAATCCAAAATATGATGTTGGGTACA
GTGACGGACCTATGTCACATCAAGATTATATTGAGAGGAGAAGAAAAGAAGCAAATAAATCTCAACCTTACGAGATCCTTATGGAAGATGTTTTGGGAACTTCCAGCTCG
GGCTTGAACTTGGTAGGATATGAAAGTGATGAGAGCACGTCTTCAGAAAGTGCAGTAAAGCAAGATCATCAAAATTCCAGTCCCTTGAATGAATTTGAGGAAATTAAGAG
CAAAAACGAGCAATGCTTCGCCATTGCAGGAGAACCTGTTTGTGTAGTATGTGGTAGATATGGAGAATACATATGCAATGAAACAAATGATGACATCTGCAGCATGGAGT
GCAAATTGAAGCTTTTGGAAATTCTTAAACGGAGGGAGGAGTCTTCAAACAGTGAAGTGAAAGATGTTGCATTACCAGAAACTAAGCATATCTTGCCTTCCCCAGAGTTT
GAGGAGGACACCTGGGATTATAAGAACCATCGCTGGTCCAAAAAGAAATCCAATCTTTGTACTTATGAATGCTGGAAATGTCAGAAGCCAGGACACCTTGCTGAAGATTG
TTTGGTTAAAACCAGTAACCAGGTAATGCAACAAAAGACTTACAATATTATACCCGGCGATCTCCTTGGACTGTACAAAAGTGCAGGTCATTTAAATGAGCATATCCACG
CACACCCAACTCATGGATTATATTACTCGCATAAACTCAAACGTCTTGTAAAATGTTGCAAATCAACATGCAAGGTGACTGACATTAAGGATCTTCTGGTGTGTCATTAC
TGTTTCAATAAAGCTTTCGACAAGTTCTATGATATGTATACTGCAACTTGGAAGGGAGTTGGACTCTCAATCATATCAGGTTCCATTTGCTGCGAAGATCACTTCACGTG
GCATCGGATGAACTGTTTCAACGCGGATGTTGAGGACAACGCCTATATCATCAATAGGAATGCTCAAAAAGATAAGTCCATTTCCATTAGTGATTTCATTTTC
Protein sequenceShow/hide protein sequence
MGSRTNFYKNPSISYKKDLNLSSALQNLRAYNIATGNAPLTEEQPPPVVKKNENRKRHREPELSSNPKYDVGYSDGPMSHQDYIERRRKEANKSQPYEILMEDVLGTSSS
GLNLVGYESDESTSSESAVKQDHQNSSPLNEFEEIKSKNEQCFAIAGEPVCVVCGRYGEYICNETNDDICSMECKLKLLEILKRREESSNSEVKDVALPETKHILPSPEF
EEDTWDYKNHRWSKKKSNLCTYECWKCQKPGHLAEDCLVKTSNQVMQQKTYNIIPGDLLGLYKSAGHLNEHIHAHPTHGLYYSHKLKRLVKCCKSTCKVTDIKDLLVCHY
CFNKAFDKFYDMYTATWKGVGLSIISGSICCEDHFTWHRMNCFNADVEDNAYIINRNAQKDKSISISDFIF