CuGenDBv2

Gene ID	MS007053
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	leukocyte receptor cluster member 1
Genome location	scaffold430:165650..166297
RNA-Seq Expression	MS007053
Synteny	MS007053
Gene Ontology terms	NA
InterPro domains	IPR019339 - CBF1-interacting co-repressor CIR, N-terminal domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0039711.1 leukocyte receptor cluster member 1-like protein [Cucumis melo var. makuwa]

4.6e-93

87.61

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPIKGS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RSRK G A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

XP_008437093.1 PREDICTED: leukocyte receptor cluster member 1 homolog [Cucumis melo]

4.6e-93

87.61

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPIKGS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RSRK G A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

XP_022154825.1 leukocyte receptor cluster member 1 [Momordica charantia]

1.7e-108

99.54

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRV
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPI GSENRV
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRV

Query:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
        EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
Subjt:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS

Query:  RKIGSAFREGDSSSRR
        RKIGSAFREGDSSSRR
Subjt:  RKIGSAFREGDSSSRR

XP_038874709.1 leukocyte receptor cluster member 1 homolog isoform X1 [Benincasa hispida]

5.1e-92

88.07

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLA V D A+P+E+DLKPGHINLFEGIKIFDP+KGSEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSK+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLERP  DD++SDEND SSRV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
          RK G+A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

XP_038874710.1 leukocyte receptor cluster member 1 homolog isoform X2 [Benincasa hispida]

5.1e-92

88.07

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLA V D A+P+E+DLKPGHINLFEGIKIFDP+KGSEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSK+KRMKKEEVEKKVIT EDEKYKLGYGVAGKGVKLPWYLERP  DD++SDEND SSRV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA 
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
          RK G+A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KKV3 Cir_N domain-containing protein

1.6e-91

85.84

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQ RKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPIKGS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA
        VEDGSKKKRMKKEEVEK+VIT EDEKYKLGYGVAGKGVK+PWYLERP   DD+++ END S RV SG+VKKGEKKTLEELRAERL+REQKEKGRERALIA
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPM--DDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIA

Query:  ERSRKIGSAFREGDSSSRR
        ERSRK G A REGD SSRR
Subjt:  ERSRKIGSAFREGDSSSRR

A0A1S3AT65 leukocyte receptor cluster member 1 homolog

2.2e-93

87.61

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPIKGS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RSRK G A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

A0A5A7TDI4 Leukocyte receptor cluster member 1-like protein

2.2e-93

87.61

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R
        MGGHGGLNILPQKRWNVYNYENREKV+RDEEAAAKEEQLKREQARKRDAE+RLEQLRTARGLAPV D ++P+E+DLKPGHINLFEGIKIFDPIKGS+N  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSEN-R

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
        VEDGSKKKRMKKEEVEKKVIT EDEKYKLGYGVAGKGVK+PWYLERP  DD+++ END SSRV +G+VKKGEKKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERP-MDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RSRK G A REGDSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

A0A6J1DKR3 leukocyte receptor cluster member 1

8.4e-109

99.54

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRV
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPI GSENRV
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRV

Query:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
        EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS
Subjt:  EDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERS

Query:  RKIGSAFREGDSSSRR
        RKIGSAFREGDSSSRR
Subjt:  RKIGSAFREGDSSSRR

A0A6J1I3I0 leukocyte receptor cluster member 1 homolog

1.1e-89

85.32

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENR-
        MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQ+RKRDAE+RLEQLRTARG+APV D  +P+E+DLKPGH+NLFEGIKIFDP+K SEN  
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENR-

Query:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLE-RPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE
         EDGSKKKRMKKEEVEK+VITAEDEKYKLGYGVAGKGVKLPWYLE R  DD++SD+N SSSRVVS +VKKG KKTLEELRAERL+REQKEKGRERALIAE
Subjt:  VEDGSKKKRMKKEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLE-RPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAE

Query:  RSRKIGSAFREGDSSSRR
        RS K G+A RE DSSSRR
Subjt:  RSRKIGSAFREGDSSSRR

SwissProt top hits

e value

%identity

Alignment

Q96BZ8 Leukocyte receptor cluster member 1

1.4e-04

28.75

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Query:  LNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLR-TARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDGSK
        +NILP+K W+V N +N  +VRRDE  A +EE+ +  +      E R E LR  AR    + ++          G ++LF   ++ +  KG     ++  +
Subjt:  LNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLR-TARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDGSK

Query:  KKRMKKEEVEKK--VITAEDEKYKLGYGVAGKGVKLPWYLERP-------------------------------MDDSDSDENDSSSRVVSGDVKKGEKK
        +KR +KE  EK   ++T       LG   A    + PWY   P                                     DE   S +   G  K+  K+
Subjt:  KKRMKKEEVEKK--VITAEDEKYKLGYGVAGKGVKLPWYLERP-------------------------------MDDSDSDENDSSSRVVSGDVKKGEKK

Query:  --TLEELRAERLRREQKEKGRERALIAERSRKIGSAFREG
          +L++LRAERLRRE  E+ R  AL+A   R  G A +EG
Subjt:  --TLEELRAERLRREQKEKGRERALIAERSRKIGSAFREG

Q9DB98 Leukocyte receptor cluster member 1 homolog

5.4e-04

28.63

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Query:  LNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLR---TARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDG
        +NILP+K W+V N +N  +VRRDE  A +EE+ +  +      E R E LR     R   P  + A P       G ++LF   ++ +  KG     ++ 
Subjt:  LNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLR---TARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDG

Query:  SKKKRMKKEEVEKK--VITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSD-------------------------------SDENDSSSRVVSGDVKKGE
         ++KR +KE  EK   ++T       LG   A    + PWY + P    D                               S E+  S        +  E
Subjt:  SKKKRMKKEEVEKK--VITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSD-------------------------------SDENDSSSRVVSGDVKKGE

Query:  KKTLEELRAERLRREQKEKGRERALIA
          +LE+LRAERL+RE  E+ R  AL+A
Subjt:  KKTLEELRAERLRREQKEKGRERALIA

Arabidopsis top hits

e value

%identity

Alignment

AT2G03010.1 Family of unknown function (DUF577)

5.4e-07

40.78

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Query:  VRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPV-----------NDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDGSKKKRMKKEEV
        VR+DEEAAA+EEQ+KRE ARKRDAE RLE LR  RGLAP+           ND    +  +   G    +E  K          ++      K +K+E V
Subjt:  VRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPV-----------NDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDGSKKKRMKKEEV

Query:  EKK
        EK+
Subjt:  EKK

AT4G16530.1 Family of unknown function (DUF577)

5.7e-49

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Query:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAP---------------------VNDVARPLES----D
        MGGHGGLNILPQKRWNVYN++NREKVR++EEAAA+EEQ+KRE+ARKRDAE RLE LR  RGLAP                     V   A  +ES    +
Subjt:  MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAP---------------------VNDVARPLES----D

Query:  LKPGHINLFEGIKIFDPI---KGSENRVEDGSKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLERPMDDSDS----DENDSS
         K GHINLFEGI+IFDPI   K  +   E+  ++K+M+KE       +A+D          EKY+LGYGVAGKGVK PWYLE+  D++DS    D++   
Subjt:  LKPGHINLFEGIKIFDPI---KGSENRVEDGSKKKRMKKEEVEKKVITAED----------EKYKLGYGVAGKGVKLPWYLERPMDDSDS----DENDSS

Query:  SRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFR
            +   K   KK+L+ELR ERL+RE+ EK RERAL  ++S++ G   R
Subjt:  SRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFR

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGAGGTCATGGAGGTCTGAATATTCTTCCTCAAAAGCGATGGAATGTGTACAACTACGAGAACAGGGAGAAAGTGCGGCGAGATGAAGAAGCCGCAGCAAAAGAAGA
ACAGCTTAAACGCGAGCAGGCAAGGAAACGGGATGCCGAGTATCGTCTTGAGCAGCTTCGTACTGCACGGGGTTTAGCTCCAGTGAATGACGTTGCGAGGCCTCTAGAAT
CAGACCTGAAACCTGGTCACATAAATCTATTTGAAGGAATCAAGATTTTTGATCCAATTAAGGGTTCAGAGAACAGAGTTGAAGATGGATCTAAGAAGAAGAGGATGAAG
AAGGAAGAAGTGGAAAAAAAGGTTATCACAGCTGAAGACGAGAAGTATAAGTTAGGTTATGGTGTTGCTGGAAAAGGAGTCAAGTTGCCATGGTACCTTGAGAGGCCTAT
GGATGATTCTGATAGCGATGAAAATGACAGTTCATCGAGAGTGGTGAGTGGGGATGTAAAAAAAGGAGAAAAGAAAACCTTGGAAGAACTGAGAGCCGAGCGTTTGAGGC
GAGAGCAGAAGGAGAAGGGAAGGGAGCGTGCTCTAATTGCAGAGAGAAGCCGGAAGATCGGGTCAGCTTTTAGAGAAGGAGATTCATCATCCAGGAGG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGGHGGLNILPQKRWNVYNYENREKVRRDEEAAAKEEQLKREQARKRDAEYRLEQLRTARGLAPVNDVARPLESDLKPGHINLFEGIKIFDPIKGSENRVEDGSKKKRMK
KEEVEKKVITAEDEKYKLGYGVAGKGVKLPWYLERPMDDSDSDENDSSSRVVSGDVKKGEKKTLEELRAERLRREQKEKGRERALIAERSRKIGSAFREGDSSSRR

MS007053 (gene) of Bitter gourd (TR) v1 genome