; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007062 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007062
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold430:245532..246295
RNA-Seq ExpressionMS007062
SyntenyMS007062
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]1.7e-10682.46Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFL  T KG+SEEEFY+CLRFNVNRLNILQLGLTL DQ GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFYKLK+ GIA EDFTTLFLPICRS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        G+I+RWITFHGFYDI YLLKLLKIK IPISMATFA T QHLLGTVSDLKHM RYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T +VYT+MKQ+
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
        FK+P+EQCEGFLYGLP+ I  F+ + KI
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

XP_022153955.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]9.1e-9281.46Show/hide
Query:  VNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRIERWITFHGFYDIAYLLKLLK
        + RLNILQLGLTLVDQ  NVAMT EFNFRDFDHISDM+G+S LD FLKN GFDFYKLK+DGI PE+FTTLFLPIC SGRIER ITFHGFY+IAYLLK LK
Subjt:  VNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRIERWITFHGFYDIAYLLKLLK

Query:  IKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKVPVEQCEGFLYGLPHRIQAFR
        IKFIPI MATFAAT QHLLG +S+LKHM RYCDGLLDG+L LKK AKLLDVKRIG AHFAG DSLLTA++YT+MKQMFK+P+EQCEGFLY LPHRI+AF 
Subjt:  IKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKVPVEQCEGFLYGLPHRIQAFR

Query:  PIVKI
         I+KI
Subjt:  PIVKI

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]4.5e-12395.61Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLRYT KGVSEEEFY+CLRFNVNRLNILQLGLTL +QNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIA EDFTTLFLPICRS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        GRIERWITFHGFYDIAYLLKLLKIK+IPISMATFAAT QHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYT+MKQM
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
        FKVPVEQ EGFLYGLPHRIQAF+PIVKI
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]3.1e-8467.54Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLR+T KGVS+EEFY CL+FNVNRL+ILQLGLTL D NG + MTWEFNF+DFD IS+MEGV SLDSFLKNKGF+F KL+  GIAP++F+  F P+ RS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        GRI++WITFHG YDIAYL+K   I  +P SM+ FA    HLLGTV+DLKHM RY D L +G+LGLKKLAKLL + R+G AHFAGSDSLLTA+VY +MK +
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
         KV  +  EGFLYGLP+ IQ +RP V I
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]9.2e-8468.28Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLR+T KGVS+EEFY CL+FNVNRL+ILQLGLTL+D+NG + MTWEFNF+DFD IS+MEGV SLDSFLKNKGF+F KL+  GIAPE+F+  F P+ RS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
         RI+RWITFHG YDIAYL+K   I  +P SM+ FA    HLLGTV+DLKHM RY D L +G+LGLKKLAKLL + RIG AHFAGSDSLLTA+VY +MK +
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAF-RPIV
         KV  +  EGFLYGLP+ IQ + RP+V
Subjt:  FKVPVEQCEGFLYGLPHRIQAF-RPIV

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease8.3e-10782.46Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFL  T KG+SEEEFY+CLRFNVNRLNILQLGLTL DQ GN+AMTWEFNFRDFDH+SDME VSSLDSFLKNKGFDFYKLK+ GIA EDFTTLFLPICRS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        G+I+RWITFHGFYDI YLLKLLKIK IPISMATFA T QHLLGTVSDLKHM RYCDGLLDG+LGLKKLAKLLDVKRI  AHFA SD+L T +VYT+MKQ+
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
        FK+P+EQCEGFLYGLP+ I  F+ + KI
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

A0A6J1DIB1 putative CCR4-associated factor 1 homolog 84.4e-9281.46Show/hide
Query:  VNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRIERWITFHGFYDIAYLLKLLK
        + RLNILQLGLTLVDQ  NVAMT EFNFRDFDHISDM+G+S LD FLKN GFDFYKLK+DGI PE+FTTLFLPIC SGRIER ITFHGFY+IAYLLK LK
Subjt:  VNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRIERWITFHGFYDIAYLLKLLK

Query:  IKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKVPVEQCEGFLYGLPHRIQAFR
        IKFIPI MATFAAT QHLLG +S+LKHM RYCDGLLDG+L LKK AKLLDVKRIG AHFAG DSLLTA++YT+MKQMFK+P+EQCEGFLY LPHRI+AF 
Subjt:  IKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKVPVEQCEGFLYGLPHRIQAFR

Query:  PIVKI
         I+KI
Subjt:  PIVKI

A0A6J1DLA5 Poly(A)-specific ribonuclease2.2e-12395.61Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLRYT KGVSEEEFY+CLRFNVNRLNILQLGLTL +QNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIA EDFTTLFLPICRS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        GRIERWITFHGFYDIAYLLKLLKIK+IPISMATFAAT QHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYT+MKQM
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
        FKVPVEQ EGFLYGLPHRIQAF+PIVKI
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

A0A6J1ESM7 Poly(A)-specific ribonuclease1.5e-8467.54Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLR+T KGVS+EEFY CL+FNVNRL+ILQLGLTL D NG + MTWEFNF+DFD IS+MEGV SLDSFLKNKGF+F KL+  GIAP++F+  F P+ RS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        GRI++WITFHG YDIAYL+K   I  +P SM+ FA    HLLGTV+DLKHM RY D L +G+LGLKKLAKLL + R+G AHFAGSDSLLTA+VY +MK +
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
         KV  +  EGFLYGLP+ IQ +RP V I
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

A0A6J1HSR3 Poly(A)-specific ribonuclease7.6e-8468.42Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS
        PGFLR T KGVS+EEFY CL+FNVNRL+ILQLGLTL D+NG + MTWEFNF+DFD IS+MEGV SLDSFLKNKGF+F  L+  GI+PE+F   F PI RS
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRS

Query:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM
        GRI+RWITFHG YDIAYL+K   I  +P SM+ FA    HLLGTV+DLKHM RY D LL+G+LGLKKLAK+L V RIG AHFAGSDSLLTA+VY +M+ +
Subjt:  GRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQM

Query:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI
         KV  +  EGFLYGLP+ IQ +RP V I
Subjt:  FKVPVEQCEGFLYGLPHRIQAFRPIVKI

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 51.0e-3241.5Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPIC--
        PG L+ T    S+E  Y  ++FNV+  +++QLGLTL  +   +  TWE N  DF+    ++   S+ +FLKN G D  K++ +GI  E+F   F  I   
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPIC--

Query:  RSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGT-VSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRM
        + G++ RW+TF G YD AYLLK L  K +P +   F  T Q LLG  V D+K M   C G L    GL+++A +L ++R+G AH AGSDS LTA V+T++
Subjt:  RSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGT-VSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRM

Q9LXM2 Probable CCR4-associated factor 1 homolog 91.1e-3137.72Show/hide
Query:  LRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNV---------AMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLF
        LR+T    + ++ Y  L+ NV+ L+++Q+GLTL D NGN+            WEFNFRDFD   D     S++  L+ +G DF +  RDG+  E F  L 
Subjt:  LRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNV---------AMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLF

Query:  LP---ICRSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLG-TVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKR-IGIAHFAGSDSLL
        +    +C       W+TFH  YD  YL+K+L  + +P ++  F    + L G  V D+KHM ++C+  L G  GL ++A+ L+V R +G  H AGSDSLL
Subjt:  LP---ICRSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLG-TVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKR-IGIAHFAGSDSLL

Query:  TAAVYTRMKQMFKVP--VEQCEGFLYGL
        T   + RM+ ++ V    E+  G LYGL
Subjt:  TAAVYTRMKQMFKVP--VEQCEGFLYGL

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.4e-3440.1Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPED-FTTLFLPICR
        P  LR T +  ++EE Y  + F+V+R  ++QLGLTL D NG +  TWE NF DF  + D     S++ FL+  G D  K++ +GI  E  F+ +F  + +
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPED-FTTLFLPICR

Query:  SGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQ
        + R   W+TFHG YDIAYLLK    + +P++   F+     +LG+V DLK M   C+G L   LGL+ LA    + R+G AH AGS++ LTA V+ ++  
Subjt:  SGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQ

Query:  MF
         F
Subjt:  MF

Q9SAI2 Probable CCR4-associated factor 1 homolog 61.5e-3340.76Show/hide
Query:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER
        Y  L+ NVN L ++QLGLT  ++ GN+          W+FNFR+FD  SD+  + S++  LK  G D  K   DGI  + F  L +    SG +      
Subjt:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER

Query:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P
        W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+ ++C+ L     GL KLA+LL+V+R+GI H AGSDSLLT+  + ++K+ F V P
Subjt:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P

Query:  VEQCEGFLYGL
        + +  G LYGL
Subjt:  VEQCEGFLYGL

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.7e-3239.07Show/hide
Query:  EEFYNCLRFNVNRLNILQLGLTLVDQNGNVA--------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI--
        E  Y  L+ NVN L ++QLGLT  D+ GN+           W+FNFR+FD  SD+    S++  L+  G DF K    GI  + F  L +    SG +  
Subjt:  EEFYNCLRFNVNRLNILQLGLTLVDQNGNVA--------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI--

Query:  --ERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMF
            W+TFH  YD  YLLKLL  + +P +   F          V D+KH+ ++C+ L     GL KLA+LLDV+R+GI H AGSDSLLT+  + ++++ F
Subjt:  --ERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMF

Query:  KV-PVEQCEGFLYGL
         +  +E+  G LYGL
Subjt:  KV-PVEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein7.1e-3441.5Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPIC--
        PG L+ T    S+E  Y  ++FNV+  +++QLGLTL  +   +  TWE N  DF+    ++   S+ +FLKN G D  K++ +GI  E+F   F  I   
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPIC--

Query:  RSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGT-VSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRM
        + G++ RW+TF G YD AYLLK L  K +P +   F  T Q LLG  V D+K M   C G L    GL+++A +L ++R+G AH AGSDS LTA V+T++
Subjt:  RSGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGT-VSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRM

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3440.76Show/hide
Query:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER
        Y  L+ NVN L ++QLGLT  ++ GN+          W+FNFR+FD  SD+  + S++  LK  G D  K   DGI  + F  L +    SG +      
Subjt:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER

Query:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P
        W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+ ++C+ L     GL KLA+LL+V+R+GI H AGSDSLLT+  + ++K+ F V P
Subjt:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P

Query:  VEQCEGFLYGL
        + +  G LYGL
Subjt:  VEQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3440.76Show/hide
Query:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER
        Y  L+ NVN L ++QLGLT  ++ GN+          W+FNFR+FD  SD+  + S++  LK  G D  K   DGI  + F  L +    SG +      
Subjt:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER

Query:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P
        W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+ ++C+ L     GL KLA+LL+V+R+GI H AGSDSLLT+  + ++K+ F V P
Subjt:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P

Query:  VEQCEGFLYGL
        + +  G LYGL
Subjt:  VEQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.1e-3440.76Show/hide
Query:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER
        Y  L+ NVN L ++QLGLT  ++ GN+          W+FNFR+FD  SD+  + S++  LK  G D  K   DGI  + F  L +    SG +      
Subjt:  YNCLRFNVNRLNILQLGLTLVDQNGNVA-------MTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRI----ER

Query:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P
        W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+ ++C+ L     GL KLA+LL+V+R+GI H AGSDSLLT+  + ++K+ F V P
Subjt:  WITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKV-P

Query:  VEQCEGFLYGL
        + +  G LYGL
Subjt:  VEQCEGFLYGL

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-3540.1Show/hide
Query:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPED-FTTLFLPICR
        P  LR T +  ++EE Y  + F+V+R  ++QLGLTL D NG +  TWE NF DF  + D     S++ FL+  G D  K++ +GI  E  F+ +F  + +
Subjt:  PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPED-FTTLFLPICR

Query:  SGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQ
        + R   W+TFHG YDIAYLLK    + +P++   F+     +LG+V DLK M   C+G L   LGL+ LA    + R+G AH AGS++ LTA V+ ++  
Subjt:  SGRIERWITFHGFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQ

Query:  MF
         F
Subjt:  MF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGGATTTCTCCGGTACACTCAGAAAGGTGTTTCAGAGGAAGAATTCTACAATTGTCTTCGATTTAATGTGAACCGATTGAACATACTCCAACTCGGTCTCACACTCGT
AGATCAAAATGGAAATGTAGCGATGACTTGGGAGTTTAATTTCAGAGATTTTGATCACATTAGCGATATGGAGGGCGTTTCTTCCCTGGACTCGTTTCTTAAGAACAAGG
GGTTCGATTTCTACAAATTGAAGAGAGACGGAATAGCTCCAGAGGATTTCACTACCCTATTTCTACCGATTTGTCGTAGTGGTAGAATCGAGAGATGGATCACATTTCAT
GGCTTCTACGACATCGCTTATTTACTGAAGCTGCTCAAAATCAAATTCATACCAATTTCTATGGCAACGTTTGCGGCTACTACTCAACATCTATTAGGTACTGTCAGCGA
TTTGAAGCATATGTGTCGCTATTGTGATGGATTGCTCGACGGCGACCTAGGGCTAAAAAAATTGGCCAAGCTGCTCGACGTAAAACGAATAGGCATAGCACACTTTGCCG
GTTCCGATAGTTTGCTCACTGCTGCAGTATACACAAGGATGAAGCAAATGTTCAAGGTTCCGGTAGAGCAATGTGAAGGGTTTCTCTACGGCTTGCCTCATCGGATTCAA
GCTTTTCGACCAATCGTGAAGATA
mRNA sequenceShow/hide mRNA sequence
CCAGGATTTCTCCGGTACACTCAGAAAGGTGTTTCAGAGGAAGAATTCTACAATTGTCTTCGATTTAATGTGAACCGATTGAACATACTCCAACTCGGTCTCACACTCGT
AGATCAAAATGGAAATGTAGCGATGACTTGGGAGTTTAATTTCAGAGATTTTGATCACATTAGCGATATGGAGGGCGTTTCTTCCCTGGACTCGTTTCTTAAGAACAAGG
GGTTCGATTTCTACAAATTGAAGAGAGACGGAATAGCTCCAGAGGATTTCACTACCCTATTTCTACCGATTTGTCGTAGTGGTAGAATCGAGAGATGGATCACATTTCAT
GGCTTCTACGACATCGCTTATTTACTGAAGCTGCTCAAAATCAAATTCATACCAATTTCTATGGCAACGTTTGCGGCTACTACTCAACATCTATTAGGTACTGTCAGCGA
TTTGAAGCATATGTGTCGCTATTGTGATGGATTGCTCGACGGCGACCTAGGGCTAAAAAAATTGGCCAAGCTGCTCGACGTAAAACGAATAGGCATAGCACACTTTGCCG
GTTCCGATAGTTTGCTCACTGCTGCAGTATACACAAGGATGAAGCAAATGTTCAAGGTTCCGGTAGAGCAATGTGAAGGGTTTCTCTACGGCTTGCCTCATCGGATTCAA
GCTTTTCGACCAATCGTGAAGATA
Protein sequenceShow/hide protein sequence
PGFLRYTQKGVSEEEFYNCLRFNVNRLNILQLGLTLVDQNGNVAMTWEFNFRDFDHISDMEGVSSLDSFLKNKGFDFYKLKRDGIAPEDFTTLFLPICRSGRIERWITFH
GFYDIAYLLKLLKIKFIPISMATFAATTQHLLGTVSDLKHMCRYCDGLLDGDLGLKKLAKLLDVKRIGIAHFAGSDSLLTAAVYTRMKQMFKVPVEQCEGFLYGLPHRIQ
AFRPIVKI