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MS007071 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007071
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionVAN3-binding protein
Genome locationscaffold430:314203..314358
RNA-Seq ExpressionMS007071
SyntenyMS007071
Gene Ontology termsGO:0055085 - transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0015267 - channel activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022154783.1 VAN3-binding protein [Momordica charantia]1.5e-2198.08Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
XP_022996403.1 VAN3-binding protein [Cucurbita maxima]1.4e-1682.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        K YCS WKY SI GL+N EEDEE+K+VSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
XP_023521873.1 VAN3-binding protein-like [Cucurbita pepo subsp. pepo]1.4e-1682.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        K YCS WKY SI GL+N EEDEE+K+VSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
XP_023532759.1 VAN3-binding protein-like [Cucurbita pepo subsp. pepo]1.4e-1682.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        K YCS WKY SI GL+N EEDEE+K+VSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
XP_038874832.1 VAN3-binding protein [Benincasa hispida]1.5e-1886.54Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        KG+CS WK+ SIHGLKN+EEDEE+KMVSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
TrEMBL top hitse value%identityAlignment
A0A0A0KRB0 Uncharacterized protein3.4e-1682.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        KGYCS  K GSIHGLK++ EDEE+KMVSS PSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
A0A1S3ASR8 VAN3-binding protein-like1.6e-1390.7Show/hide
Query:  GSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        GSIHGLKN+ EDEE+KMVSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  GSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
A0A6J1DL94 VAN3-binding protein7.1e-2298.08Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
A0A6J1GZT3 VAN3-binding protein9.0e-1782.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        K YCS WKY SI GL+N EEDEE+K+VSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
A0A6J1KAN8 VAN3-binding protein6.9e-1782.69Show/hide
Query:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
        K YCS WKY SI GL+N EEDEE+K+VSSLPSIPQPQTPQEP+EFLARSWSL
Subjt:  KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G17350.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region5.8e-0850.88Show/hide
Query:  GYCSGWK---YGSIHGLKNVEEDEE---LKMVSSLPSIPQPQTPQEPLEFLARSWSL
        G+ S WK     S  G +N+EE+ E   L+      SIPQPQTP+EP+EFL+RSWSL
Subjt:  GYCSGWK---YGSIHGLKNVEEDEE---LKMVSSLPSIPQPQTPQEPLEFLARSWSL
AT5G47440.1 Plant protein of unknown function (DUF828) with plant pleckstrin homology-like region7.1e-0646.43Show/hide
Query:  GYCSGW--KYGSIHGLKNVEEDEELKMVSS---LPSIPQPQTPQEPLEFLARSWSL
        G+ S W     S+ G +N E + E   V S   +  IPQPQTP+EP++FL+RSWSL
Subjt:  GYCSGW--KYGSIHGLKNVEEDEELKMVSS---LPSIPQPQTPQEPLEFLARSWSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AAAGGCTACTGTTCAGGTTGGAAATATGGTTCGATTCATGGGCTGAAGAATGTGGAGGAAGATGAAGAGCTGAAAATGGTGTCATCTTTGCCTTCAATTCCTCAGCCTCA
GACTCCACAGGAACCTCTGGAGTTCTTGGCAAGGTCTTGGAGTCTC
mRNA sequenceShow/hide mRNA sequence
AAAGGCTACTGTTCAGGTTGGAAATATGGTTCGATTCATGGGCTGAAGAATGTGGAGGAAGATGAAGAGCTGAAAATGGTGTCATCTTTGCCTTCAATTCCTCAGCCTCA
GACTCCACAGGAACCTCTGGAGTTCTTGGCAAGGTCTTGGAGTCTC
Protein sequenceShow/hide protein sequence
KGYCSGWKYGSIHGLKNVEEDEELKMVSSLPSIPQPQTPQEPLEFLARSWSL