; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007097 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007097
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionmethyl-CpG-binding domain-containing protein 2-like
Genome locationscaffold25:139860..142302
RNA-Seq ExpressionMS007097
SyntenyMS007097
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001739 - Methyl-CpG DNA binding
IPR011124 - Zinc finger, CW-type
IPR016177 - DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586120.1 Methyl-CpG-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]7.9e-12672.94Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+++S  N++GTPR+DV+A+ SSSSSSLSSSSSENEL        QS+ N+NASRELVLYNP A DG A+EPVS  PIE   P   GH TP 
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        SSR + SVGAFT+QCASCFKWRLIPTKEKYEEIREHLLEQPF+CE AREWRPDISCDDPADITQDGSRLWAIDKPNIA+PP GWQR LHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY+APSGKKLRSMVDIQKYL+EHPEYQTEG+SM RFSFQIPKPLQENYVRKRRA+I    DGS+LESG VNPIS A P  STALQLGRP LP L S   
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL---------FDEYEK
        +I+ + R  KKV+R   KEM  +SL          D+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL---------FDEYEK

XP_004150390.1 methyl-CpG-binding domain-containing protein 2 [Cucumis sativus]9.6e-13275Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+E SL N Q TPRQDVIAV SSSSSSLSSSSSENEL        QS+SN+N SRELV+Y+PSA+DG A++PVS  P+++   P  GH TPN
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        SSR LPSVGAFTVQCA CFKWRLIPTKEKYEEIREHLLE+PF+CETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+E+YVRKRR N+    D S+LESGEV PISWARP DSTALQLG+P L  L ST  
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        V +P+TR  KKVKR   +EM R+SL             FD+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

XP_008450795.1 PREDICTED: methyl-CpG-binding domain-containing protein 2-like [Cucumis melo]1.9e-13275.29Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+E SL N Q TPRQDVIAVSSSSSS   SSSSENEL        QS+ NEN+SRELV+YNPSA DG A++PV A P+++   P  GH TPN
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        S+R LPSVGAFTVQCA CFKWRLIPTKEKYEEIREHLLEQPF+CETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+E+YVRKRR NI    D S+LESGEV PISWARP DSTALQLG+P LP L ST  
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        V  P+TR  KKVKR   +EM R+SL             FD+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

XP_022149871.1 methyl-CpG-binding domain-containing protein 2-like [Momordica charantia]1.2e-17799.68Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV
        MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV

Query:  GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG
        GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG
Subjt:  GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG

Query:  KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVIDPITRSGKKV
        KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVID ITRSGKKV
Subjt:  KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVIDPITRSGKKV

Query:  KRKEMHRNSLFDEYEK
        KRKEMHRNSLFDEYEK
Subjt:  KRKEMHRNSLFDEYEK

XP_038890273.1 methyl-CpG-binding domain-containing protein 2 isoform X1 [Benincasa hispida]4.3e-13273.74Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL----------------------QSRSNENASRELVLYNPSANDGGADEPVSARPI
        MVG EENDL+E SL N Q TPRQDV AV SS SSSLSSSS ENEL                      QS+SNEN SRELVLY+ SANDGGA+EPVS  P+
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL----------------------QSRSNENASRELVLYNPSANDGGADEPVSARPI

Query:  ERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQR
        E   PP  GH TPNSSR LPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLE+PF+CETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQR
Subjt:  ERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQR

Query:  LLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQ
        LLHIRGEGSTKFADVYY+APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+ENYVRKRR N+    DGS+LESG V+PISWARP DSTALQ
Subjt:  LLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQ

Query:  LGRPRLPGLPSTETVIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        LG+P L  L  T  V +PITR  KKVKR   +EM R+SL             FD+YEK
Subjt:  LGRPRLPGLPSTETVIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

TrEMBL top hitse value%identityAlignment
A0A0A0LHE0 Uncharacterized protein4.6e-13275Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+E SL N Q TPRQDVIAV SSSSSSLSSSSSENEL        QS+SN+N SRELV+Y+PSA+DG A++PVS  P+++   P  GH TPN
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        SSR LPSVGAFTVQCA CFKWRLIPTKEKYEEIREHLLE+PF+CETAR WRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+E+YVRKRR N+    D S+LESGEV PISWARP DSTALQLG+P L  L ST  
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        V +P+TR  KKVKR   +EM R+SL             FD+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

A0A1S3BR32 methyl-CpG-binding domain-containing protein 2-like9.4e-13375.29Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+E SL N Q TPRQDVIAVSSSSSS   SSSSENEL        QS+ NEN+SRELV+YNPSA DG A++PV A P+++   P  GH TPN
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        S+R LPSVGAFTVQCA CFKWRLIPTKEKYEEIREHLLEQPF+CETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+E+YVRKRR NI    D S+LESGEV PISWARP DSTALQLG+P LP L ST  
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        V  P+TR  KKVKR   +EM R+SL             FD+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

A0A5D3CST2 Methyl-CpG-binding domain-containing protein 2-like9.4e-13375.29Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN
        MVG EENDL+E SL N Q TPRQDVIAVSSSSSS   SSSSENEL        QS+ NEN+SRELV+YNPSA DG A++PV A P+++   P  GH TPN
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPN

Query:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
        S+R LPSVGAFTVQCA CFKWRLIPTKEKYEEIREHLLEQPF+CETAREWRPDI+CDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD
Subjt:  SSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFAD

Query:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET
        VYY APSGKKLRSMVDIQKYL+EHPEYQTEGVSMTRFSFQIPKPL+E+YVRKRR NI    D S+LESGEV PISWARP DSTALQLG+P LP L ST  
Subjt:  VYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTET

Query:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK
        V  P+TR  KKVKR   +EM R+SL             FD+YEK
Subjt:  VIDPITRSGKKVKR---KEMHRNSL-------------FDEYEK

A0A6J1D9Q9 methyl-CpG-binding domain-containing protein 2-like5.6e-17899.68Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV
        MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSV

Query:  GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG
        GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG
Subjt:  GAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSG

Query:  KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVIDPITRSGKKV
        KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVID ITRSGKKV
Subjt:  KKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVIDPITRSGKKV

Query:  KRKEMHRNSLFDEYEK
        KRKEMHRNSLFDEYEK
Subjt:  KRKEMHRNSLFDEYEK

A0A6J1K3E0 methyl-CpG-binding domain-containing protein 2-like3.8e-12677.02Show/hide
Query:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSAND-GGADEPVSARPIERPHPPFHGHSTP
        MVG EENDL+E SL NHQ T +QDVIAV SSSSSS SSSSSE+EL        QS+SNEN SRELVLYNPSAND GGA EPVS  P+    PP  GH TP
Subjt:  MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENEL--------QSRSNENASRELVLYNPSAND-GGADEPVSARPIERPHPPFHGHSTP

Query:  NSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFA
        NSSR L  VGAFTVQCASCFKWRLIPTKEKYEEIREHLLE+PF+CETAREWRPDISC+DPADITQD  RLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFA
Subjt:  NSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFA

Query:  DVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTE
        DVYY+APSGK+LRSMVDIQKYL+EHPEYQTEGV MTRFSFQ PKPLQENYVRKRRAN+    DGS+LESGEV PISWARP +ST LQLGRP L  L  T 
Subjt:  DVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKRRANI----DGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTE

Query:  TVIDPITRSGKKVKR---KEMH
         V + +++  KK KR   KEMH
Subjt:  TVIDPITRSGKKVKR---KEMH

SwissProt top hitse value%identityAlignment
Q5XEN5 Methyl-CpG-binding domain-containing protein 12.4e-2438.3Show/hide
Query:  SVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAP
        S+  F VQC  C KWR I T+++YE+IR  + E PF C+T    +  +SC+D  D+  D SR W IDKP + + P G++R L +R + S    D YY+ P
Subjt:  SVGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAP

Query:  SGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE
        +GKKL+S  +I  ++  + +Y+     +  F+F +PK ++E
Subjt:  SGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE

Q8LA53 Methyl-CpG-binding domain-containing protein 26.6e-7556.27Show/hide
Query:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI
        +S S S ++  SSS NE      +    +LV+Y+   ND   +E  PV ++P+             +S    PS+GAFTVQCASCFKWRL+P+ +KYEEI
Subjt:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI

Query:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS
        RE LLE PF C+TAREW+PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYYVAPSGKKLRS V++QKYL ++ EY  EGV 
Subjt:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS

Query:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL
        +++FSFQIPKPLQ++YVRKR A    +ID +    + E NP++W  P D  +LQLG P   GL
Subjt:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL

Q9FZP6 Putative methyl-CpG-binding domain protein 123.0e-3552.48Show/hide
Query:  VQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLR
        VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W    P+I   P GW R +HIR E STKFADVYY  PSG++LR
Subjt:  VQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLR

Query:  SMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKR
        S  ++Q +L  HPEY  EGV+ ++FSFQIPKPL +NYV+KR
Subjt:  SMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKR

Q9LYB9 Methyl-CpG-binding domain-containing protein 42.1e-2538.57Show/hide
Query:  VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPS
        +  +  QC +C KWR+I ++E+YE+IR  +LE PF+C+     +  +SC++PADI  D SR W IDKP + + P G++R L +R + S    D YY  P+
Subjt:  VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPS

Query:  GKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE
        GKKLRS  +I  ++  +PE++     +  F+F +PK +++
Subjt:  GKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE

Q9Z2E1 Methyl-CpG-binding domain protein 27.2e-0536.46Show/hide
Query:  TQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEG-STKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQ----IPKPLQENYVRKR
        T+ G R+   D P +   PPGW++   IR  G S   +DVYY +PSGKK RS   + +YL          V ++ F F+    +P  LQ+N  R R
Subjt:  TQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEG-STKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQ----IPKPLQENYVRKR

Arabidopsis top hitse value%identityAlignment
AT3G63030.1 methyl-CPG-binding domain 41.5e-2638.57Show/hide
Query:  VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPS
        +  +  QC +C KWR+I ++E+YE+IR  +LE PF+C+     +  +SC++PADI  D SR W IDKP + + P G++R L +R + S    D YY  P+
Subjt:  VGAFTVQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPS

Query:  GKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE
        GKKLRS  +I  ++  +PE++     +  F+F +PK +++
Subjt:  GKKLRSMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQE

AT5G35330.1 methyl-CPG-binding domain protein 024.7e-7656.27Show/hide
Query:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI
        +S S S ++  SSS NE      +    +LV+Y+   ND   +E  PV ++P+             +S    PS+GAFTVQCASCFKWRL+P+ +KYEEI
Subjt:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI

Query:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS
        RE LLE PF C+TAREW+PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYYVAPSGKKLRS V++QKYL ++ EY  EGV 
Subjt:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS

Query:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL
        +++FSFQIPKPLQ++YVRKR A    +ID +    + E NP++W  P D  +LQLG P   GL
Subjt:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL

AT5G35330.2 methyl-CPG-binding domain protein 024.7e-7656.27Show/hide
Query:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI
        +S S S ++  SSS NE      +    +LV+Y+   ND   +E  PV ++P+             +S    PS+GAFTVQCASCFKWRL+P+ +KYEEI
Subjt:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI

Query:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS
        RE LLE PF C+TAREW+PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYYVAPSGKKLRS V++QKYL ++ EY  EGV 
Subjt:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS

Query:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL
        +++FSFQIPKPLQ++YVRKR A    +ID +    + E NP++W  P D  +LQLG P   GL
Subjt:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL

AT5G35330.3 methyl-CPG-binding domain protein 024.7e-7656.27Show/hide
Query:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI
        +S S S ++  SSS NE      +    +LV+Y+   ND   +E  PV ++P+             +S    PS+GAFTVQCASCFKWRL+P+ +KYEEI
Subjt:  VSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADE--PVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASCFKWRLIPTKEKYEEI

Query:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS
        RE LLE PF C+TAREW+PDISCD PADI QDG+RLWAIDKPNI++PP GWQRLL IRGEG T+FADVYYVAPSGKKLRS V++QKYL ++ EY  EGV 
Subjt:  REHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQTEGVS

Query:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL
        +++FSFQIPKPLQ++YVRKR A    +ID +    + E NP++W  P D  +LQLG P   GL
Subjt:  MTRFSFQIPKPLQENYVRKRRA----NIDGSRLE-SGEVNPISWARPGDSTALQLGRPRLPGL

AT5G35338.2 methyl-CPG-binding domain 122.1e-3652.48Show/hide
Query:  VQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLR
        VQC  C KWRLIP+ + Y  I+E  L+ PF C T   W P++SC+ P D T   +  W    P+I   P GW R +HIR E STKFADVYY  PSG++LR
Subjt:  VQCASCFKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLR

Query:  SMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKR
        S  ++Q +L  HPEY  EGV+ ++FSFQIPKPL +NYV+KR
Subjt:  SMVDIQKYLVEHPEYQTEGVSMTRFSFQIPKPLQENYVRKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGGTGTTGAAGAAAATGACTTGAGTGAATCAAGTTTGTTAAACCACCAAGGAACTCCGCGCCAAGATGTTATAGCTGTTTCTTCTTCTTCTTCATCTTCTTTGTC
GTCTTCTTCGTCTGAGAACGAGTTACAATCCCGATCTAATGAAAATGCCTCTCGTGAACTGGTACTATACAACCCATCTGCTAATGATGGAGGTGCAGACGAACCTGTAT
CCGCACGACCTATAGAGCGCCCTCACCCCCCATTTCATGGACACTCGACTCCCAATTCTTCCAGAGCTTTGCCATCTGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGT
TTTAAATGGAGGCTCATTCCAACAAAGGAAAAATACGAGGAAATACGCGAACATCTGTTGGAGCAACCTTTTCACTGTGAAACTGCTCGGGAGTGGCGGCCTGATATCTC
TTGTGACGATCCTGCTGACATTACTCAAGATGGCAGTAGGCTTTGGGCAATTGACAAGCCTAATATAGCACAGCCCCCTCCTGGTTGGCAAAGGCTACTACACATCAGAG
GTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATGTTGCGCCATCGGGCAAGAAGCTTCGTTCCATGGTGGATATCCAAAAATACCTGGTTGAACATCCAGAATACCAA
ACAGAAGGTGTATCCATGACACGGTTTTCATTTCAAATCCCGAAGCCTCTGCAGGAAAATTACGTGAGAAAGCGTCGTGCCAATATCGACGGTTCTAGGCTTGAATCTGG
TGAAGTGAATCCGATATCATGGGCTCGTCCAGGCGATTCTACTGCATTGCAGCTTGGAAGACCCAGACTCCCGGGACTGCCCTCAACTGAAACCGTTATCGACCCCATCA
CTCGGTCAGGAAAGAAGGTGAAAAGAAAGGAGATGCACAGAAATTCCCTATTTGATGAATATGAAAAG
mRNA sequenceShow/hide mRNA sequence
ATGGTTGGTGTTGAAGAAAATGACTTGAGTGAATCAAGTTTGTTAAACCACCAAGGAACTCCGCGCCAAGATGTTATAGCTGTTTCTTCTTCTTCTTCATCTTCTTTGTC
GTCTTCTTCGTCTGAGAACGAGTTACAATCCCGATCTAATGAAAATGCCTCTCGTGAACTGGTACTATACAACCCATCTGCTAATGATGGAGGTGCAGACGAACCTGTAT
CCGCACGACCTATAGAGCGCCCTCACCCCCCATTTCATGGACACTCGACTCCCAATTCTTCCAGAGCTTTGCCATCTGTAGGGGCCTTTACTGTCCAGTGTGCAAGCTGT
TTTAAATGGAGGCTCATTCCAACAAAGGAAAAATACGAGGAAATACGCGAACATCTGTTGGAGCAACCTTTTCACTGTGAAACTGCTCGGGAGTGGCGGCCTGATATCTC
TTGTGACGATCCTGCTGACATTACTCAAGATGGCAGTAGGCTTTGGGCAATTGACAAGCCTAATATAGCACAGCCCCCTCCTGGTTGGCAAAGGCTACTACACATCAGAG
GTGAAGGAAGCACCAAGTTTGCTGATGTGTATTATGTTGCGCCATCGGGCAAGAAGCTTCGTTCCATGGTGGATATCCAAAAATACCTGGTTGAACATCCAGAATACCAA
ACAGAAGGTGTATCCATGACACGGTTTTCATTTCAAATCCCGAAGCCTCTGCAGGAAAATTACGTGAGAAAGCGTCGTGCCAATATCGACGGTTCTAGGCTTGAATCTGG
TGAAGTGAATCCGATATCATGGGCTCGTCCAGGCGATTCTACTGCATTGCAGCTTGGAAGACCCAGACTCCCGGGACTGCCCTCAACTGAAACCGTTATCGACCCCATCA
CTCGGTCAGGAAAGAAGGTGAAAAGAAAGGAGATGCACAGAAATTCCCTATTTGATGAATATGAAAAG
Protein sequenceShow/hide protein sequence
MVGVEENDLSESSLLNHQGTPRQDVIAVSSSSSSSLSSSSSENELQSRSNENASRELVLYNPSANDGGADEPVSARPIERPHPPFHGHSTPNSSRALPSVGAFTVQCASC
FKWRLIPTKEKYEEIREHLLEQPFHCETAREWRPDISCDDPADITQDGSRLWAIDKPNIAQPPPGWQRLLHIRGEGSTKFADVYYVAPSGKKLRSMVDIQKYLVEHPEYQ
TEGVSMTRFSFQIPKPLQENYVRKRRANIDGSRLESGEVNPISWARPGDSTALQLGRPRLPGLPSTETVIDPITRSGKKVKRKEMHRNSLFDEYEK