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MS007115 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007115
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein Ycf2
Genome locationscaffold25:433069..433167
RNA-Seq ExpressionMS007115
SyntenyMS007115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ARC96926.1 hypothetical protein RF2 [Aruncus dioicus]3.2e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
ARK37451.1 hypothetical chloroplast RF21 [Hevea brasiliensis]3.2e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
AWI69848.1 Ycf2 [Malouetia tamaquarina]3.2e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
QBE88539.1 hypothetical chloroplast RF2 [Lophiocarpus polystachyus]3.2e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
YP_010025042.1 hypothetical chloroplast RF21 [Colobanthus affinis]3.2e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
TrEMBL top hitse value%identityAlignment
A0A1P8SCK0 Protein Ycf21.6e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
A0A6H0EK84 Protein Ycf21.6e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
A0A6M4B309 Protein Ycf21.6e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
A0A7M1I8C5 Protein Ycf21.6e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
A0A7S8HP97 Uncharacterized protein1.6e-0684.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
SwissProt top hitse value%identityAlignment
A4QKN5 Protein Ycf24.7e-0878.79Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM S+ RDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
B1NWJ3 Protein Ycf24.2e-0984.85Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLENKMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
Q09WV7 Protein Ycf22.1e-0881.82Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLE KMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
Q2QD30 Protein Ycf22.1e-0881.82Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLE KMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
Q49KT6 Protein Ycf22.1e-0881.82Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLE KMF TNGF SITM SNVRDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
Arabidopsis top hitse value%identityAlignment
ATCG00860.1 Chloroplast Ycf2;ATPase, AAA type, core1.7e-0875.76Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLE KMF TNGF SITM S+ RDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
ATCG01280.1 Chloroplast Ycf2;ATPase, AAA type, core1.7e-0875.76Show/hide
Query:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE
        RGFHLE KMF TNGF SITM S+ RDL+ LTNE
Subjt:  RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AGAGGATTTCATTTGGAAAATAAAATGTTCCGTACTAATGGATTCAGTTCCATAACCATGAGTTCCAATGTACGGGATCTTATAACACTTACTAATGAG
mRNA sequenceShow/hide mRNA sequence
AGAGGATTTCATTTGGAAAATAAAATGTTCCGTACTAATGGATTCAGTTCCATAACCATGAGTTCCAATGTACGGGATCTTATAACACTTACTAATGAG
Protein sequenceShow/hide protein sequence
RGFHLENKMFRTNGFSSITMSSNVRDLITLTNE