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MS007118 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007118
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOSBP(Oxysterol binding protein)-related protein 4B
Genome locationscaffold25:470950..471417
RNA-Seq ExpressionMS007118
SyntenyMS007118
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029841.1 hypothetical protein SDJN02_08184, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-4162.03Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MGGCIS RSSS+  A + I++VHL+GHVQHF  PIT R VTG    P E+F+ TAAQLVS A +PALNPDA+LQPGKVYF+LPFSTL PDVSP DL+SIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ
        R+LTAAAKSA + P      G  W +P   +S Q WKP LDTI+E+ +N+  ++SDLQ
Subjt:  RRLTAAAKSAGKTPPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ

XP_008460258.1 PREDICTED: uncharacterized protein LOC103499134 [Cucumis melo]9.2e-4365.24Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MGGC+S RSSS   AD +++VVHL+GHVQHF  PIT R V  KPP   E+F+CTAAQLVS A++PAL+PDAVLQPGKVYF+LPFSTL PDVS  DLASIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ
        RRLTAAAKSA K+   PP      G  W   AAG+S Q W+PLLDTIKE+P N  +RI +SDL+
Subjt:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ

XP_011650123.1 uncharacterized protein LOC105434722 [Cucumis sativus]3.5e-4263.64Show/hide
Query:  MGGCISHRSSS-STVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASI
        MGGCISHRSSS +  A ++++VVHL+GHVQHF  PIT R V G+PP   E+F+CTAAQLVS A++PALNPD VLQPGKVYF+LP STL PDVS  DLASI
Subjt:  MGGCISHRSSS-STVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASI

Query:  ARRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQ--RINKSDLQ
        ARRLTAAAKSA K+   PP      G  W    AG+S Q W+PLLDTI+E+P N   RI+ SDL+
Subjt:  ARRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQ--RINKSDLQ

XP_022996489.1 uncharacterized protein LOC111491721 [Cucurbita maxima]3.3e-4061.73Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MG CIS RSSS+  A + I++VHL+GHVQHF  PIT   VTG    P E+F+ TAAQLVS A +PALNPDA+LQPGKVYF+LPFSTL PDVSP DL+SIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ
        R+LTAAAKSA   P PPP      G  W +P A +S Q WKP LDTI+E+ +N+  ++SDLQ
Subjt:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ

XP_023547215.1 uncharacterized protein LOC111806092 [Cucurbita pepo subsp. pepo]1.9e-4061.39Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTG---KPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MGGCIS RSSS+  A + I++VHL+GHVQHF  PIT R VTG   +P E+F+ TAAQLVS A +PALNPDA+LQPGKVYF+LPFSTL PDVSP DL+SIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTG---KPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ
        R+LTAAAKSA +        G  W +PA    S+ WKP LDTI+E+ +N+  ++SDLQ
Subjt:  RRLTAAAKSAGKTPPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ

TrEMBL top hitse value%identityAlignment
A0A0A0LHC0 Uncharacterized protein1.7e-4263.64Show/hide
Query:  MGGCISHRSSS-STVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASI
        MGGCISHRSSS +  A ++++VVHL+GHVQHF  PIT R V G+PP   E+F+CTAAQLVS A++PALNPD VLQPGKVYF+LP STL PDVS  DLASI
Subjt:  MGGCISHRSSS-STVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASI

Query:  ARRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQ--RINKSDLQ
        ARRLTAAAKSA K+   PP      G  W    AG+S Q W+PLLDTI+E+P N   RI+ SDL+
Subjt:  ARRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQ--RINKSDLQ

A0A1S3CC70 uncharacterized protein LOC1034991344.4e-4365.24Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MGGC+S RSSS   AD +++VVHL+GHVQHF  PIT R V  KPP   E+F+CTAAQLVS A++PAL+PDAVLQPGKVYF+LPFSTL PDVS  DLASIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ
        RRLTAAAKSA K+   PP      G  W   AAG+S Q W+PLLDTIKE+P N  +RI +SDL+
Subjt:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ

A0A5D3CAJ8 DUF4228 domain-containing protein4.4e-4365.24Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MGGC+S RSSS   AD +++VVHL+GHVQHF  PIT R V  KPP   E+F+CTAAQLVS A++PAL+PDAVLQPGKVYF+LPFSTL PDVS  DLASIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPP---EHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ
        RRLTAAAKSA K+   PP      G  W   AAG+S Q W+PLLDTIKE+P N  +RI +SDL+
Subjt:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLN--QRINKSDLQ

A0A6J1K8V3 uncharacterized protein LOC1114917211.6e-4061.73Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA
        MG CIS RSSS+  A + I++VHL+GHVQHF  PIT   VTG    P E+F+ TAAQLVS A +PALNPDA+LQPGKVYF+LPFSTL PDVSP DL+SIA
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGK---PPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIA

Query:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ
        R+LTAAAKSA   P PPP      G  W +P A +S Q WKP LDTI+E+ +N+  ++SDLQ
Subjt:  RRLTAAAKSAGKTPPPPP----SSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQ

W9QLQ9 Uncharacterized protein9.3e-3347.65Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRL
        MG C+S RSSSS +  + +RVVHL+G+V+ F HP++V +VTGKP ++F+CT AQL+S  + P + P+ +L+ GK+YF+LP+S LQ DVSP+DLASIAR+L
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRL

Query:  TAAAKSAGKTPPPPP-----------SSGPLWNSPAAGQS----SQTWKPLLDTIKERPLNQRINKSDLQ
        TA AK+  + P   P            S P+W+SPA   +     + WKP+LDTI+ER   +R ++S+LQ
Subjt:  TAAAKSAGKTPPPPP-----------SSGPLWNSPAAGQS----SQTWKPLLDTIKERPLNQRINKSDLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein3.3e-0626.67Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHV----------TGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSP
        MG C+S   +    +    ++V ++G ++ +  P+    V          +     +FLC +  L      PA+  D +LQ  ++YF+LP S  Q  +S 
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHV----------TGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSP

Query:  MDLASIARRLTAA-AKSAGK
         D+A++A + + A  K+AGK
Subjt:  MDLASIARRLTAA-AKSAGK

AT2G30230.1 unknown protein1.8e-0430.3Show/hide
Query:  IRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTL
        IR+VHL+GHV     P+T   +    P H L              L+P++ L+ G +YF++P +++
Subjt:  IRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTL

AT3G50800.1 unknown protein3.6e-0528.44Show/hide
Query:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRL
        MG C S  S  +    E  +++   G +Q F  P+ V  +  K P  F+C +  +    +  A+     L+PG++YF+LP + L   +   ++A++A + 
Subjt:  MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRL

Query:  TAA-AKSAG
        ++A AKS G
Subjt:  TAA-AKSAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCTGTATCTCCCACCGATCATCTTCCTCCACCGTCGCCGACGAAAAAATCCGAGTTGTTCATCTGAGCGGCCACGTCCAGCACTTCCTCCACCCCATAACCGT
CCGCCACGTCACCGGAAAGCCGCCGGAGCACTTCCTCTGCACCGCTGCGCAGCTGGTCTCCGCCGCCTCCGCCCCGGCGCTGAACCCCGACGCCGTCCTCCAGCCCGGCA
AGGTCTACTTCATGCTTCCCTTCTCCACTCTCCAACCCGACGTTTCCCCCATGGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCCGCCAAATCCGCCGGAAAGACA
CCGCCGCCGCCGCCATCCAGTGGGCCCCTTTGGAACTCTCCGGCGGCGGGGCAGAGCTCGCAGACGTGGAAGCCATTGTTGGACACCATTAAGGAGAGGCCGTTGAACCA
GAGGATCAACAAATCGGATTTGCAAGCT
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGCTGTATCTCCCACCGATCATCTTCCTCCACCGTCGCCGACGAAAAAATCCGAGTTGTTCATCTGAGCGGCCACGTCCAGCACTTCCTCCACCCCATAACCGT
CCGCCACGTCACCGGAAAGCCGCCGGAGCACTTCCTCTGCACCGCTGCGCAGCTGGTCTCCGCCGCCTCCGCCCCGGCGCTGAACCCCGACGCCGTCCTCCAGCCCGGCA
AGGTCTACTTCATGCTTCCCTTCTCCACTCTCCAACCCGACGTTTCCCCCATGGACTTGGCCTCCATAGCCAGAAGGCTCACCGCCGCCGCCAAATCCGCCGGAAAGACA
CCGCCGCCGCCGCCATCCAGTGGGCCCCTTTGGAACTCTCCGGCGGCGGGGCAGAGCTCGCAGACGTGGAAGCCATTGTTGGACACCATTAAGGAGAGGCCGTTGAACCA
GAGGATCAACAAATCGGATTTGCAAGCT
Protein sequenceShow/hide protein sequence
MGGCISHRSSSSTVADEKIRVVHLSGHVQHFLHPITVRHVTGKPPEHFLCTAAQLVSAASAPALNPDAVLQPGKVYFMLPFSTLQPDVSPMDLASIARRLTAAAKSAGKT
PPPPPSSGPLWNSPAAGQSSQTWKPLLDTIKERPLNQRINKSDLQA