; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007121 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007121
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionDefensin-like protein
Genome locationscaffold25:521302..521661
RNA-Seq ExpressionMS007121
SyntenyMS007121
Gene Ontology termsNA
InterPro domainsIPR039641 - Low-molecular-weight cysteine-rich protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031758.1 defensin-like protein 182 [Cucumis melo var. makuwa]1.2e-2651.64Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGR----KMCNAGLGLCSGQCNSGCCNAKCASLH
        VVG  +IC +GLG C +N  CD RCK++H   ENPQGSC+   + + LCYCLY+CG        +P  +    + C +GLGLC+GQC S CCNAKC   +
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGR----KMCNAGLGLCSGQCNSGCCNAKCASLH

Query:  HGGNGYCDNNAGVNLCQCTYPC
         GG GYCD N GV LCQC++PC
Subjt:  HGGNGYCDNNAGVNLCQCTYPC

KAG6586037.1 putative defensin-like protein 180, partial [Cucurbita argyrosperma subsp. sororia]3.8e-2854.31Show/hide
Query:  VGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGY
        V   D+C +GLG C   SDCD RCK+RH   ENPQG C       LC CLYSC        + PP  K+C  GLG CS +CN+ CC+AKCAS H+GG GY
Subjt:  VGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGY

Query:  CDNNAGVNLCQCTYPC
        CD N G+ LCQC+YPC
Subjt:  CDNNAGVNLCQCTYPC

KAG7020813.1 Defensin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]3.8e-2854.31Show/hide
Query:  VGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGY
        V   D+C +GLG C   SDCD RCK+RH   ENPQG C       LC CLYSC        + PP  K+C  GLG CS +CN+ CC+AKCAS H+GG GY
Subjt:  VGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGY

Query:  CDNNAGVNLCQCTYPC
        CD N G+ LCQC+YPC
Subjt:  CDNNAGVNLCQCTYPC

TYK13447.1 defensin-like protein 182 [Cucumis melo var. makuwa]9.2e-2754.24Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN
        VVG  +IC +GLG C +N  CD RCK++H   ENPQG C+   + + LCYCLY+C    G   + P   + C +GLGLC+GQC S CCNAKC S + GG 
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN

Query:  GYCDNNAGVNLCQCTYPC
        GYCD N GV LCQCT+PC
Subjt:  GYCDNNAGVNLCQCTYPC

XP_004148336.2 defensin-like protein 182 [Cucumis sativus]1.7e-2551.69Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN
        VVG  DIC +GLG C +N  CD RCK++H   ENPQGSC+   + + LC CLYSC         +P     C +GLGLC+ QC S CCNAKC   + GG 
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN

Query:  GYCDNNAGVNLCQCTYPC
        G+CD N GV+LCQC++PC
Subjt:  GYCDNNAGVNLCQCTYPC

TrEMBL top hitse value%identityAlignment
A0A067FEG8 Defensin-like protein (Fragment)4.8e-2148.67Show/hide
Query:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN
        GD C++GLG C +++DCD  CK+RH  +   QGSC+ T + PLC C Y CG         P   K C AGLG C  QC   CCN KCA+   GG G+CDN
Subjt:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN

Query:  NAGVNLCQCTYPC
             LCQCTY C
Subjt:  NAGVNLCQCTYPC

A0A0A0LMG4 Defensin-like protein8.4e-2651.69Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN
        VVG  DIC +GLG C +N  CD RCK++H   ENPQGSC+   + + LC CLYSC         +P     C +GLGLC+ QC S CCNAKC   + GG 
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN

Query:  GYCDNNAGVNLCQCTYPC
        G+CD N GV+LCQC++PC
Subjt:  GYCDNNAGVNLCQCTYPC

A0A5A7SMA4 Defensin-like protein5.8e-2751.64Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGR----KMCNAGLGLCSGQCNSGCCNAKCASLH
        VVG  +IC +GLG C +N  CD RCK++H   ENPQGSC+   + + LCYCLY+CG        +P  +    + C +GLGLC+GQC S CCNAKC   +
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGR----KMCNAGLGLCSGQCNSGCCNAKCASLH

Query:  HGGNGYCDNNAGVNLCQCTYPC
         GG GYCD N GV LCQC++PC
Subjt:  HGGNGYCDNNAGVNLCQCTYPC

A0A5D3CNI5 Defensin-like protein4.5e-2754.24Show/hide
Query:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN
        VVG  +IC +GLG C +N  CD RCK++H   ENPQG C+   + + LCYCLY+C    G   + P   + C +GLGLC+GQC S CCNAKC S + GG 
Subjt:  VVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYT-AEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGN

Query:  GYCDNNAGVNLCQCTYPC
        GYCD N GV LCQCT+PC
Subjt:  GYCDNNAGVNLCQCTYPC

V4U112 Defensin-like protein4.3e-2249.56Show/hide
Query:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN
        GD C++GLG C +++DCD +CK+RH  +   QGSC+ T + PLC C Y CG         PP  K C AGLG C  QC   CCN KCA+   GG G+CDN
Subjt:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN

Query:  NAGVNLCQCTYPC
             LCQCTY C
Subjt:  NAGVNLCQCTYPC

SwissProt top hitse value%identityAlignment
P82772 Putative defensin-like protein 1804.5e-1636.61Show/hide
Query:  DICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNN
        D C + LGLC +   CD RC+++H    +    C+    +  C C Y C      G  +PP   +C+ G G+CSG+C   CC+  CA  ++GG G+C++ 
Subjt:  DICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNN

Query:  AGVNLCQCTYPC
           N CQC YPC
Subjt:  AGVNLCQCTYPC

P82773 Defensin-like protein 1821.1e-1739.82Show/hide
Query:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN
        GD C DGLG C   ++CD RCK++H    + + SC+ +  VPLC C Y C          P   K C+ G G+CS +C   CC+  CA  + GG+G+C+ 
Subjt:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN

Query:  NAGVNLCQCTYPC
            + CQC YPC
Subjt:  NAGVNLCQCTYPC

P82789 Defensin-like protein 1812.0e-1639.64Show/hide
Query:  ICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNNA
        IC D LGLC     CD RCK++H    + +  C+    + LC C Y CG             K+CN GLG C   CN  CC+  CA  ++GG+GYC+   
Subjt:  ICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNNA

Query:  GVNLCQCTYPC
          +LC C YPC
Subjt:  GVNLCQCTYPC

Arabidopsis top hitse value%identityAlignment
AT4G30070.1 low-molecular-weight cysteine-rich 597.6e-1939.82Show/hide
Query:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN
        GD C DGLG C   ++CD RCK++H    + + SC+ +  VPLC C Y C          P   K C+ G G+CS +C   CC+  CA  + GG+G+C+ 
Subjt:  GDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDN

Query:  NAGVNLCQCTYPC
            + CQC YPC
Subjt:  NAGVNLCQCTYPC

AT5G38317.1 low-molecular-weight cysteine-rich 583.2e-1736.61Show/hide
Query:  DICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNN
        D C + LGLC +   CD RC+++H    +    C+    +  C C Y C      G  +PP   +C+ G G+CSG+C   CC+  CA  ++GG G+C++ 
Subjt:  DICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNN

Query:  AGVNLCQCTYPC
           N CQC YPC
Subjt:  AGVNLCQCTYPC

AT5G38330.1 low-molecular-weight cysteine-rich 801.4e-1739.64Show/hide
Query:  ICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNNA
        IC D LGLC     CD RCK++H    + +  C+    + LC C Y CG             K+CN GLG C   CN  CC+  CA  ++GG+GYC+   
Subjt:  ICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNNA

Query:  GVNLCQCTYPC
          +LC C YPC
Subjt:  GVNLCQCTYPC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGGATGTGGTGGTGGGGGGCGGGGACATATGCCGAGACGGACTAGGGCTTTGCAGTTCAAACTCAGATTGCGACGGGAGGTGCAAATCAAGGCACAAGGCGGAGGAGAA
TCCACAGGGCAGCTGCGAGTACACCGCCGAGGTCCCGCTGTGCTACTGCCTTTACAGTTGCGGCGGAGGCGGAGGCGGAGGCGGAGTAGTGCCGCCGGGCCGGAAGATGT
GCAATGCTGGGCTGGGGCTATGCAGCGGGCAGTGCAACAGTGGTTGCTGCAATGCCAAGTGCGCAAGCCTTCACCATGGGGGCAATGGCTACTGTGACAACAATGCTGGA
GTCAATTTGTGCCAATGTACCTATCCTTGC
mRNA sequenceShow/hide mRNA sequence
GTGGATGTGGTGGTGGGGGGCGGGGACATATGCCGAGACGGACTAGGGCTTTGCAGTTCAAACTCAGATTGCGACGGGAGGTGCAAATCAAGGCACAAGGCGGAGGAGAA
TCCACAGGGCAGCTGCGAGTACACCGCCGAGGTCCCGCTGTGCTACTGCCTTTACAGTTGCGGCGGAGGCGGAGGCGGAGGCGGAGTAGTGCCGCCGGGCCGGAAGATGT
GCAATGCTGGGCTGGGGCTATGCAGCGGGCAGTGCAACAGTGGTTGCTGCAATGCCAAGTGCGCAAGCCTTCACCATGGGGGCAATGGCTACTGTGACAACAATGCTGGA
GTCAATTTGTGCCAATGTACCTATCCTTGC
Protein sequenceShow/hide protein sequence
VDVVVGGGDICRDGLGLCSSNSDCDGRCKSRHKAEENPQGSCEYTAEVPLCYCLYSCGGGGGGGGVVPPGRKMCNAGLGLCSGQCNSGCCNAKCASLHHGGNGYCDNNAG
VNLCQCTYPC