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MS007122 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007122
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRHOMBOID-like protein
Genome locationscaffold25:528391..528510
RNA-Seq ExpressionMS007122
SyntenyMS007122
Gene Ontology termsGO:0016020 - membrane (cellular component)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583424.1 RHOMBOID-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.7e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
XP_022970547.1 RHOMBOID-like protein 1 [Cucurbita maxima]3.7e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
XP_022998333.1 RHOMBOID-like protein 1 isoform X2 [Cucurbita maxima]3.7e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
XP_023519656.1 RHOMBOID-like protein 1 [Cucurbita pepo subsp. pepo]3.7e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
XP_038895553.1 RHOMBOID-like protein 1 [Benincasa hispida]3.7e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
TrEMBL top hitse value%identityAlignment
A0A1S3C5Q5 RHOMBOID-like protein1.8e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
A0A5D3BGU5 RHOMBOID-like protein1.8e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
A0A6J1HZE9 RHOMBOID-like protein1.8e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
A0A6J1K9Y9 RHOMBOID-like protein1.8e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
A0A6J1KGF7 RHOMBOID-like protein1.8e-0467.5Show/hide
Query:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
        LEKMGALEVDK+VYGHQPWRLIS  +    +F IL   LS
Subjt:  LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTAGAAAAGATGGGTGCTCTGGAAGTTGATAAAATGGTTTACGGGCACCAGCCATGGAGATTGATCTCTTGGGCATTTTCAAGTTATTTAATTTTTATTATTTTGGAGAC
CAATTTATCG
mRNA sequenceShow/hide mRNA sequence
TTAGAAAAGATGGGTGCTCTGGAAGTTGATAAAATGGTTTACGGGCACCAGCCATGGAGATTGATCTCTTGGGCATTTTCAAGTTATTTAATTTTTATTATTTTGGAGAC
CAATTTATCG
Protein sequenceShow/hide protein sequence
LEKMGALEVDKMVYGHQPWRLISWAFSSYLIFIILETNLS