CuGenDBv2

Gene ID	MS007128
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor bHLH146
Genome location	scaffold25:610841..611386
RNA-Seq Expression	MS007128
Synteny	MS007128
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR044660 - Transcription factor IBH1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6586090.1 Transcription factor basic helix-loop-helix 146, partial [Cucurbita argyrosperma subsp. sororia]

8.2e-51

68.45

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEPNKL Y MFARNY K LM SL KIS +H     Q+ QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ+++   GNG N F  SL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        Q +KF+RE  E E+EE EE EE EE   +K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

XP_022153354.1 transcription factor bHLH146 [Momordica charantia]

1.8e-82

93.96

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
        MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF

Query:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        SREK           EEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
Subjt:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

XP_022938205.1 transcription factor bHLH146-like [Cucurbita moschata]

9.6e-52

69.52

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEPNKL Y MFARNY K LM SL KIS +H     QN QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ+++   GNG N F  SL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        Q +KFSRE  E E+EE EE EE EE   +K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

XP_022969610.1 transcription factor bHLH146-like [Cucurbita maxima]

8.2e-51

68.45

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEP+KL Y MFARNY K LM SL KIS +H     QN QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ++++   NG N F FSL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
          +KFSRE  E E+EE EE EE EE +++K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

XP_023538247.1 transcription factor bHLH146-like [Cucurbita pepo subsp. pepo]

4.8e-51

68.45

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEPNKL Y MFARNY K LM SL KIS +H     QN QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ+++   GNG N F FSL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        QT+KFS+E  E E EE EE +E       K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJA7 Uncharacterized protein

9.4e-45

63.78

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS--PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNG-RNSFDFSLQT
        M R++VRK RRVFS+EP+K+ Y MF RNY K+LM SL KIS     QN +K+VKFEVDMAMA SASEF+WG ALK+KLLQ+ +   GNG  N FDFS+QT
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS--PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNG-RNSFDFSLQT

Query:  LKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        +K    +E    EEE+   EEEEE++++MENGL+KLRKI+PGG+N +   G+L EEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  LKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

A0A1S4DZN3 uncharacterized protein At4g30180

1.2e-47

64.74

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS--PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQEN----GNGNGRNSFDFS
        M R+IVRK RRVFS+EPNK+ Y MFARNY K+LM SL KIS     QN QK+V+FEVDMAMA SASEF+WG ALK+KLLQ+ +     GNG+  N FDFS
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS--PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQEN----GNGNGRNSFDFS

Query:  LQTLKFSREKE--EEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        LQT+K    K    EEE+  E+EEEEEEE++++MENGL+KLRKI+PGG++ +    +L EEDDLLKQTESY+KCLELQVNVLR LV+TNT
Subjt:  LQTLKFSREKE--EEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

A0A6J1DIU0 transcription factor bHLH146

8.7e-83

93.96

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
        MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF

Query:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        SREK           EEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
Subjt:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

A0A6J1FJ33 transcription factor bHLH146-like

4.7e-52

69.52

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEPNKL Y MFARNY K LM SL KIS +H     QN QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ+++   GNG N F  SL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
        Q +KFSRE  E E+EE EE EE EE   +K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

A0A6J1I0E6 transcription factor bHLH146-like

4.0e-51

68.45

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL
        MGRQI+RKR+RV SLEP+KL Y MFARNY K LM SL KIS +H     QN QK+VKFEVDMAMA SA+EF+WG+ALK+KLLQ++++   NG N F FSL
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNH-----QNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSL

Query:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
          +KFSRE  E E+EE EE EE EE +++K+ENGL+KLRKI+PGG     SNG+ LEEDDL KQTESYIKCLELQVNVLRCLVDTNT
Subjt:  QTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

SwissProt top hits

e value

%identity

Alignment

Q9SUM5 Transcription factor bHLH146

8.0e-17

36.81

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
        M RQI+ +++RVFSLEPNK    +F R Y  +L+ +L K++ N  + ++ VK EVDMA+ALSA EFAW   L QKL     + + N   +   S   ++ 
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF

Query:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
            ++E   EE   EE            L +L+K+LPGGE  N         +++L +  +YIKCLELQ   L+ +V  +T
Subjt:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

Arabidopsis top hits

e value

%identity

Alignment

AT2G18969.1 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors

3.2e-21

41.27

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS-------PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDF
        M RQI+ KR+RVFSL+PNK    +FAR Y  +L+ +L KI+        N Q+L++ VK EVDMA ALSA EFAW   L+QKLL    +   +  +S   
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKIS-------PNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDF

Query:  SLQTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
          + L+ S +++  E+ ++ +EEEE  E KK+++    +L+K+LPGGE  N         +++L +  SYI CLELQ+ VL+ +V  NT
Subjt:  SLQTLKFSREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

AT4G30180.1 sequence-specific DNA binding transcription factors;transcription regulators

5.7e-18

36.81

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Query:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF
        M RQI+ +++RVFSLEPNK    +F R Y  +L+ +L K++ N  + ++ VK EVDMA+ALSA EFAW   L QKL     + + N   +   S   ++ 
Subjt:  MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKF

Query:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT
            ++E   EE   EE            L +L+K+LPGGE  N         +++L +  +YIKCLELQ   L+ +V  +T
Subjt:  SREKEEEEEEEEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

Sequences

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CDS sequence

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ATGGGAAGGCAAATTGTGAGAAAAAGAAGAAGGGTATTTTCCCTAGAACCAAACAAGCTGGTGTACATCATGTTTGCAAGAAACTATGCCAAAAATTTGATGGCTTCTTT
GTCAAAAATCTCTCCAAATCATCAAAATTTGCAGAAAGTTGTGAAGTTTGAAGTGGACATGGCAATGGCTTTATCTGCTTCAGAATTTGCATGGGGCCATGCTCTCAAAC
AAAAGCTTCTTCAGAAACAAGAAAATGGCAATGGCAATGGGCGCAATAGCTTTGATTTCTCCCTCCAAACACTGAAATTTTCTCGAGAAAAAGAAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGATAAGAAGAAGATGGAAAATGGATTGGTGAAGCTAAGGAAGATCTTACCAGGTGGTGAAAATAATAATGATAGTAA
TGGAGATTTGTTGGAAGAAGATGATTTGTTGAAACAAACTGAGAGTTATATTAAATGTCTTGAGTTGCAGGTGAATGTTCTTAGATGTTTGGTTGATACAAACACA

mRNA sequence

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Protein sequence

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MGRQIVRKRRRVFSLEPNKLVYIMFARNYAKNLMASLSKISPNHQNLQKVVKFEVDMAMALSASEFAWGHALKQKLLQKQENGNGNGRNSFDFSLQTLKFSREKEEEEEE
EEEEEEEEEEEDKKKMENGLVKLRKILPGGENNNDSNGDLLEEDDLLKQTESYIKCLELQVNVLRCLVDTNT

MS007128 (gene) of Bitter gourd (TR) v1 genome