; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007139 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007139
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionOSBP(Oxysterol binding protein)-related protein 4B, putative
Genome locationscaffold25:736210..736731
RNA-Seq ExpressionMS007139
SyntenyMS007139
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029810.1 hypothetical protein SDJN02_08153, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-6070.05Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERP--HPRPRLRMSLRFWRKSEKKR
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPP+SPPPAV+SLGLP PCIE+P   PRPR  M LRFWR+ +K R
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERP--HPRPRLRMSLRFWRKSEKKR

Query:  ENGDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        + G            DKLET SF+SSD EFMASPRD   S+SSSSSSSSPSSL+ESL VRNMGRVS GRP       +I+R LACYH
Subjt:  ENGDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

XP_022153305.1 uncharacterized protein LOC111020830 [Momordica charantia]3.5e-9198.28Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPP+SPPPAVLSLGLPKPCIERP+PRPRLRMSLRFWRKSEKKREN
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRPWQINRFLACYHC
        GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSS PSSLLESLNVRNMGRVSFGRPWQINRFLACYHC
Subjt:  GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRPWQINRFLACYHC

XP_022929606.1 uncharacterized protein LOC111436141 [Cucurbita moschata]2.7e-5969.73Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPP+SPPPAV+SLGLP PCIE+P  RPR  M L FWR+ +K R+ 
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        G            DKLET SF+SSD EFMASPRD   S+SSSSSSSSPSSL+ESL VRNMGRVS GRP       +I+R LACYH
Subjt:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

XP_022997465.1 uncharacterized protein LOC111492375 [Cucurbita maxima]4.9e-6170.81Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPP+SPPPAVLSLGLP PCIE+P  RPR  M LRFWR+ +K R++
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        G             KLET SF+SSD EFMASPRDS+SS SSSSSSSSPSSL+ESL VR+MGRVS GRP       +I+R LACYH
Subjt:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

XP_023546389.1 uncharacterized protein LOC111805512 [Cucurbita pepo subsp. pepo]1.7e-5868.65Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPF WETQPGTPKDPPPQ++LPP+SPPPAV+SLGLP PCIE+P  RPR  M LRFWR+ +K R+ 
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        G            DKLET SF+SSD EFMASPRD   S+SSSSSSSSPSSL+ESL V+NMGR S GRP       +I+R LACYH
Subjt:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

TrEMBL top hitse value%identityAlignment
A0A5A7UK88 Putative OSBP(Oxysterol binding protein)-related protein 4B1.8e-5365.79Show/hide
Query:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKP-CIERPHPRPRLRMSLRFWRKSEKK
        M+G+ FHWD K+KVISRTSS+GCSS SIYY GTA +GVPFKWETQPGTPKDPPPQ++LPP+SPPPAVLSLG+PKP CI++P  R   RM LRFW+K  K 
Subjt:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKP-CIERPHPRPRLRMSLRFWRKSEKK

Query:  RENGDGF------GHPDKLETSSFMSSDGEFMA--SPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        R+ G          + DKLET SF+SSD EFMA  SPRD +SS S+SSSSSSPSS ++SLNV N  +VSFGRP      WQINR L CYH
Subjt:  RENGDGF------GHPDKLETSSFMSSDGEFMA--SPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

A0A5D3BQA0 Putative OSBP(Oxysterol binding protein)-related protein 4B4.8e-5466.32Show/hide
Query:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKP-CIERPHPRPRLRMSLRFWRKSEKK
        M+G+ FHWD K+KVISRTSS+GCSS SIYY GTA +GVPFKWETQPGTPKDPPPQ++LPP+SPPPAVLSLG+PKP CI++P  R   RM LRFW+K  K 
Subjt:  MDGK-FHWDTKSKVISRTSSVGCSSRSIYYCGTA-EGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKP-CIERPHPRPRLRMSLRFWRKSEKK

Query:  RENGDGF------GHPDKLETSSFMSSDGEFMA--SPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        R+ G          + DKLET SF+SSD EFMA  SPRDS+SS S+SSSSSSPSS ++SLNV N  +VSFGRP      WQINR L CYH
Subjt:  RENGDGF------GHPDKLETSSFMSSDGEFMA--SPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

A0A6J1DGF8 uncharacterized protein LOC1110208301.7e-9198.28Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPP+SPPPAVLSLGLPKPCIERP+PRPRLRMSLRFWRKSEKKREN
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRPWQINRFLACYHC
        GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSS PSSLLESLNVRNMGRVSFGRPWQINRFLACYHC
Subjt:  GDGFGHPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRPWQINRFLACYHC

A0A6J1ENL5 uncharacterized protein LOC1114361411.3e-5969.73Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPP+SPPPAV+SLGLP PCIE+P  RPR  M L FWR+ +K R+ 
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        G            DKLET SF+SSD EFMASPRD   S+SSSSSSSSPSSL+ESL VRNMGRVS GRP       +I+R LACYH
Subjt:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

A0A6J1K9Q8 uncharacterized protein LOC1114923752.4e-6170.81Show/hide
Query:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN
        MDG FHWD KSKVI+RTSS+GCSSRS YYCG AEGVPFKWETQPGTPKDPPPQ++LPP+SPPPAVLSLGLP PCIE+P  RPR  M LRFWR+ +K R++
Subjt:  MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKREN

Query:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH
        G             KLET SF+SSD EFMASPRDS+SS SSSSSSSSPSSL+ESL VR+MGRVS GRP       +I+R LACYH
Subjt:  GDGFG------HPDKLETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRP------WQINRFLACYH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G40475.1 unknown protein1.1e-0552.54Show/hide
Query:  SKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQE--MLPPISPPPAVLS
        SK+I + SS   SS  IYY G A  VPF WET+PGTPK     E   LPP++PPP+  S
Subjt:  SKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQE--MLPPISPPPAVLS

AT4G25845.1 BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2)3.1e-1350Show/hide
Query:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRL---RMSLRFWRKSEKKR
        ISR SSVG      Y     EGVPF+WE QPGTP +  P+E++PP+SPPPA+LSLGLPKP I    P+  +   ++ LR W+    KR
Subjt:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRL---RMSLRFWRKSEKKR

AT4G25850.2 OSBP(oxysterol binding protein)-related protein 4B3.1e-1350Show/hide
Query:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRL---RMSLRFWRKSEKKR
        ISR SSVG      Y     EGVPF+WE QPGTP +  P+E++PP+SPPPA+LSLGLPKP I    P+  +   ++ LR W+    KR
Subjt:  ISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRL---RMSLRFWRKSEKKR

AT5G01790.1 unknown protein1.8e-0548.15Show/hide
Query:  SRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQ-EMLPPISPPPAVLS
        S  S+   S R  YY G A  VPF+WE+ PGTPK P  +   LPP++PPP+  S
Subjt:  SRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQ-EMLPPISPPPAVLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGGAAAATTTCATTGGGATACAAAGAGCAAAGTGATATCAAGAACCTCCTCAGTTGGCTGTTCTTCTCGCAGCATTTATTACTGTGGAACAGCTGAAGGAGTCCC
TTTCAAATGGGAAACACAGCCAGGAACTCCCAAGGATCCTCCCCCTCAAGAAATGCTTCCCCCTATCAGCCCTCCGCCCGCCGTCCTCAGCCTCGGGTTACCGAAACCCT
GCATCGAACGCCCGCATCCCCGACCCCGACTCCGAATGAGCCTTAGGTTTTGGAGGAAAAGCGAGAAGAAAAGGGAGAATGGAGATGGTTTCGGTCACCCTGATAAGTTG
GAAACTTCTTCGTTTATGAGCTCGGACGGCGAGTTTATGGCATCTCCTCGAGATTCGGTGTCGTCGTTGTCGTCTTCGTCTTCTTCGTCGTCACCGTCGTCTTTGCTCGA
GTCGTTAAATGTACGAAATATGGGGAGGGTGTCATTTGGAAGGCCTTGGCAAATTAACAGATTTCTGGCTTGTTACCATTGC
mRNA sequenceShow/hide mRNA sequence
ATGGATGGAAAATTTCATTGGGATACAAAGAGCAAAGTGATATCAAGAACCTCCTCAGTTGGCTGTTCTTCTCGCAGCATTTATTACTGTGGAACAGCTGAAGGAGTCCC
TTTCAAATGGGAAACACAGCCAGGAACTCCCAAGGATCCTCCCCCTCAAGAAATGCTTCCCCCTATCAGCCCTCCGCCCGCCGTCCTCAGCCTCGGGTTACCGAAACCCT
GCATCGAACGCCCGCATCCCCGACCCCGACTCCGAATGAGCCTTAGGTTTTGGAGGAAAAGCGAGAAGAAAAGGGAGAATGGAGATGGTTTCGGTCACCCTGATAAGTTG
GAAACTTCTTCGTTTATGAGCTCGGACGGCGAGTTTATGGCATCTCCTCGAGATTCGGTGTCGTCGTTGTCGTCTTCGTCTTCTTCGTCGTCACCGTCGTCTTTGCTCGA
GTCGTTAAATGTACGAAATATGGGGAGGGTGTCATTTGGAAGGCCTTGGCAAATTAACAGATTTCTGGCTTGTTACCATTGC
Protein sequenceShow/hide protein sequence
MDGKFHWDTKSKVISRTSSVGCSSRSIYYCGTAEGVPFKWETQPGTPKDPPPQEMLPPISPPPAVLSLGLPKPCIERPHPRPRLRMSLRFWRKSEKKRENGDGFGHPDKL
ETSSFMSSDGEFMASPRDSVSSLSSSSSSSSPSSLLESLNVRNMGRVSFGRPWQINRFLACYHC