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MS007152 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007152
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionZinc finger CONSTANS-like protein
Genome locationscaffold25:901302..901439
RNA-Seq ExpressionMS007152
SyntenyMS007152
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR010402 - CCT domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598861.1 Zinc finger protein CONSTANS-LIKE 5, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1397.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

XP_008451877.1 PREDICTED: zinc finger protein CONSTANS-LIKE 5-like [Cucumis melo]1.0e-1397.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

XP_022153294.1 zinc finger protein CONSTANS-LIKE 5-like [Momordica charantia]7.7e-14100Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

XP_022929787.1 zinc finger protein CONSTANS-LIKE 5-like [Cucurbita moschata]1.0e-1397.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

XP_023545435.1 zinc finger protein CONSTANS-LIKE 5-like [Cucurbita pepo subsp. pepo]1.0e-1397.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

TrEMBL top hitse value%identityAlignment
A0A1S3BTB5 zinc finger protein CONSTANS-LIKE 5-like4.8e-1497.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

A0A5A7UM20 Zinc finger protein CONSTANS-LIKE 5-like4.8e-1497.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

A0A6J1DIM9 zinc finger protein CONSTANS-LIKE 5-like3.7e-14100Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

A0A6J1ENN4 zinc finger protein CONSTANS-LIKE 5-like4.8e-1497.83Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRFVKRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

A0A6J1K9M9 zinc finger protein CONSTANS-LIKE 5-like6.3e-1495.65Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPR+KGRF+KRSE
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

SwissProt top hitse value%identityAlignment
Q39057 Zinc finger protein CONSTANS1.8e-1388.64Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKR
        DREARVLRYREK+K RKFEKTIRYASRKAYAEIRPR+ GRF KR
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKR

Q940T9 Zinc finger protein CONSTANS-LIKE 43.6e-1484.78Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARV+RYREK+KNRKFEKTIRYASRKAYAE+RPRIKGRF KR++
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

Q96502 Zinc finger protein CONSTANS-LIKE 24.7e-1489.13Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARVLRYREKKK RKF+KTIRYASRKAYAEIRPRIKGRF KR E
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

Q9FHH8 Zinc finger protein CONSTANS-LIKE 57.2e-1591.3Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREK+KNRKFEKTIRYASRKAYAE RPRIKGRF KR+E
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

Q9SK53 Zinc finger protein CONSTANS-LIKE 32.1e-1486.96Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARVLRYREK+KNRKFEKTIRYASRKAYAE+RPRIKGRF KR++
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

Arabidopsis top hitse value%identityAlignment
AT2G24790.1 CONSTANS-like 31.5e-1586.96Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARVLRYREK+KNRKFEKTIRYASRKAYAE+RPRIKGRF KR++
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

AT3G02380.1 CONSTANS-like 23.3e-1589.13Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARVLRYREKKK RKF+KTIRYASRKAYAEIRPRIKGRF KR E
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

AT5G15840.1 B-box type zinc finger protein with CCT domain1.3e-1488.64Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKR
        DREARVLRYREK+K RKFEKTIRYASRKAYAEIRPR+ GRF KR
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKR

AT5G24930.1 CONSTANS-like 42.5e-1584.78Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        +REARV+RYREK+KNRKFEKTIRYASRKAYAE+RPRIKGRF KR++
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE

AT5G57660.1 CONSTANS-like 55.1e-1691.3Show/hide
Query:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE
        DREARVLRYREK+KNRKFEKTIRYASRKAYAE RPRIKGRF KR+E
Subjt:  DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GATCGGGAGGCGAGGGTTTTGAGGTACAGAGAGAAGAAGAAGAATCGGAAATTCGAGAAGACGATTCGGTACGCGTCCAGGAAAGCTTACGCCGAAATCCGGCCGAGAAT
CAAAGGGCGGTTCGTTAAACGGAGCGAA
mRNA sequenceShow/hide mRNA sequence
GATCGGGAGGCGAGGGTTTTGAGGTACAGAGAGAAGAAGAAGAATCGGAAATTCGAGAAGACGATTCGGTACGCGTCCAGGAAAGCTTACGCCGAAATCCGGCCGAGAAT
CAAAGGGCGGTTCGTTAAACGGAGCGAA
Protein sequenceShow/hide protein sequence
DREARVLRYREKKKNRKFEKTIRYASRKAYAEIRPRIKGRFVKRSE