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MS007155 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007155
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold25:986449..986640
RNA-Seq ExpressionMS007155
SyntenyMS007155
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7976272.1 hypothetical protein I3843_06G141300 [Carya illinoinensis]5.8e-1254.84Show/hide
Query:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        EP++ K +R+ +SW   YLSKGG+LT++++ LS LPTY+LS+F IPA+V+  IEK  R+FLW
Subjt:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

TYK27680.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.8e-1362.5Show/hide
Query:  FLEPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        FL+PI+ K  +K +SW Y ++SKGGKLT+L+A LS +PTY LSVFK PA V K IEK  RNFLW
Subjt:  FLEPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

XP_026384917.1 uncharacterized protein LOC113280517 [Papaver somniferum]1.2e-1258.06Show/hide
Query:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        +PI+ KFD + S W    LS+GGKL++L+ +LS LPTYY S+FK P  V K++EKKMRNFLW
Subjt:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

XP_026429782.1 uncharacterized protein LOC113326232 [Papaver somniferum]3.1e-1361.29Show/hide
Query:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        +PI+ KFD + S W    LSKGGKL +L+ +LS LPTYY S+FK P  V KL+EKKMRNFLW
Subjt:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

XP_026444651.1 uncharacterized protein LOC113345006 [Papaver somniferum]2.6e-1254.84Show/hide
Query:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        +PI+ KF+ + S+W    LSKGGKLT+L+ +L+ LP YY S+F+ PA V K++E+KMRNFLW
Subjt:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

TrEMBL top hitse value%identityAlignment
A0A2N9GDT7 Uncharacterized protein1.3e-1258.06Show/hide
Query:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        +PI+ K DR+ + W   YLSKGG+L ++++ LS LPTYYLS+F IPA V+K IEK  RNFLW
Subjt:  EPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

A0A2N9GNB3 SMP-LTD domain-containing protein1.3e-1260.66Show/hide
Query:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        PIL K +RK + W   YLSKGG+LT+L++ LS LPTY+LS+F IPA V++ IEK  RNFLW
Subjt:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

A0A2N9GQ21 Reverse transcriptase domain-containing protein1.3e-1260.66Show/hide
Query:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        PIL K +RK + W   YLSKGG+LT+L++ LS LPTY+LS+F IPA V++ IEK  RNFLW
Subjt:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

A0A2N9HSR3 zf-RVT domain-containing protein1.3e-1260.66Show/hide
Query:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        PIL K +R+ + W   YLSKGG+LT+L++ LS LPTYYLS+FKIP  V+K IEK  R+FLW
Subjt:  PILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

A0A5D3DWQ9 LINE-1 retrotransposable element ORF2 protein8.8e-1462.5Show/hide
Query:  FLEPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        FL+PI+ K  +K +SW Y ++SKGGKLT+L+A LS +PTY LSVFK PA V K IEK  RNFLW
Subjt:  FLEPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657503.6e-0433.33Show/hide
Query:  ILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW
        IL +   + S W    LS  G+LT+ +AVLS +P + +S   +P  +   +++  R FLW
Subjt:  ILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTTTGGAGCCGATCCTATACAAATTCGACAGGAAATTCAGCAGCTGGAACTATGCTTATCTATCGAAAGGAGGAAAATTGACTATGCTTGAGGCTGTTTTGAGCAAACT
TCCAACTTACTATCTTTCAGTTTTTAAAATCCCAGCCAAAGTGTCTAAGTTGATAGAAAAGAAAATGAGAAATTTTCTTTGG
mRNA sequenceShow/hide mRNA sequence
TTTTTGGAGCCGATCCTATACAAATTCGACAGGAAATTCAGCAGCTGGAACTATGCTTATCTATCGAAAGGAGGAAAATTGACTATGCTTGAGGCTGTTTTGAGCAAACT
TCCAACTTACTATCTTTCAGTTTTTAAAATCCCAGCCAAAGTGTCTAAGTTGATAGAAAAGAAAATGAGAAATTTTCTTTGG
Protein sequenceShow/hide protein sequence
FLEPILYKFDRKFSSWNYAYLSKGGKLTMLEAVLSKLPTYYLSVFKIPAKVSKLIEKKMRNFLW