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MS007158 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007158
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionGlycosyltransferases
Genome locationscaffold25:1023984..1024519
RNA-Seq ExpressionMS007158
SyntenyMS007158
Gene Ontology termsGO:0009834 - plant-type secondary cell wall biogenesis (biological process)
GO:0010417 - glucuronoxylan biosynthetic process (biological process)
GO:0071555 - cell wall organization (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0015018 - galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (molecular function)
GO:0042285 - xylosyltransferase activity (molecular function)
InterPro domainsIPR005027 - Glycosyl transferase, family 43
IPR029044 - Nucleotide-diphospho-sugar transferases


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AEM42987.1 glycosyltransferase [Siraitia grosvenorii]2.4e-3493.83Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        WEGRHRMEAQMRLHALRIV K MLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EEVENPPI AQG
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

KAG6604164.1 putative beta-1,4-xylosyltransferase IRX14H, partial [Cucurbita argyrosperma subsp. sororia]5.4e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK  LDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EEVENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

XP_008440310.1 PREDICTED: probable beta-1,4-xylosyltransferase IRX14 [Cucumis melo]2.4e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK MLDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EE+ENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

XP_022132973.1 probable beta-1,4-xylosyltransferase IRX14 [Momordica charantia]8.3e-3591.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDE+QNVKWFGALSVGIIVQ DKQDES +EVE+PPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

XP_023544263.1 probable beta-1,4-xylosyltransferase IRX14 [Cucurbita pepo subsp. pepo]5.4e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK  LDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EEVENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

TrEMBL top hitse value%identityAlignment
A0A1S3B0S9 Glycosyltransferases1.2e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK MLDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EE+ENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

A0A5D3CNX8 Glycosyltransferases1.2e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK MLDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EE+ENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

A0A6J1BU12 Glycosyltransferases4.0e-3591.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDE+QNVKWFGALSVGIIVQ DKQDES +EVE+PPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

A0A6J1GCZ4 Glycosyltransferases2.6e-3491.57Show/hide
Query:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        T WEGRHRMEAQMRLHALRIVSK  LDG VIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EEVENPPI AQG
Subjt:  TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

K7NC00 Glycosyltransferases1.2e-3493.83Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        WEGRHRMEAQMRLHALRIV K MLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ DKQDES EEVENPPI AQG
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

SwissProt top hitse value%identityAlignment
B9FCV3 Probable glucuronosyltransferase Os04g06503009.0e-0836.99Show/hide
Query:  AQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG
        +++R+HALR + KR +DG V+F D++++   E FDE Q VK  GA+ VG++ + +   E+   ++ P   A+G
Subjt:  AQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG

Q653F4 Probable beta-1,4-xylosyltransferase IRX141.9e-1848.81Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDE---SLEEVENPPISAQG
        W  RH  E +MRLHALR++ +R +DG ++F DDSN+HS+E FDE+Q V+W GA+SVGI+      D+   S E+ +N P+  QG
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDE---SLEEVENPPISAQG

Q8L707 Beta-1,4-xylosyltransferase IRX147.4e-1857.53Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVE
        WE R ++E  MRL ALR+V +  LDG V+F DDSNMHSME FDEIQNVKWFG +SVGI+      +E +  +E
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVE

Q9FH90 Probable beta-1,4-xylosyltransferase IRX14H7.1e-2162.16Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVEN
        WE RH++E +MRLHALR+V ++ LDG V+F DDSNMHSME FDEIQ VKWFGALSVGI+      DE    ++N
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVEN

Arabidopsis top hitse value%identityAlignment
AT1G27600.1 Nucleotide-diphospho-sugar transferases superfamily protein8.1e-0436.17Show/hide
Query:  ALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ
        AL  +    LDG V F DD N++S+E F  ++ +  FG   V ++ Q
Subjt:  ALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ

AT1G27600.2 Nucleotide-diphospho-sugar transferases superfamily protein8.1e-0436.17Show/hide
Query:  ALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ
        AL  +    LDG V F DD N++S+E F  ++ +  FG   V ++ Q
Subjt:  ALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQ

AT4G36890.1 Nucleotide-diphospho-sugar transferases superfamily protein5.2e-1957.53Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVE
        WE R ++E  MRL ALR+V +  LDG V+F DDSNMHSME FDEIQNVKWFG +SVGI+      +E +  +E
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVE

AT5G67230.1 Nucleotide-diphospho-sugar transferases superfamily protein5.1e-2262.16Show/hide
Query:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVEN
        WE RH++E +MRLHALR+V ++ LDG V+F DDSNMHSME FDEIQ VKWFGALSVGI+      DE    ++N
Subjt:  WEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ACTTTTTGGGAGGGTAGGCATCGAATGGAGGCTCAGATGAGGCTTCATGCCTTGAGAATTGTGAGCAAAAGGATGCTGGATGGAACTGTGATATTTGTGGATGACAGTAA
TATGCATAGTATGGAGTTTTTTGACGAGATCCAGAATGTAAAGTGGTTTGGTGCTCTTTCTGTTGGAATCATTGTTCAGTTTGATAAACAAGATGAGTCTCTAGAGGAGG
TGGAGAACCCACCAATCTCTGCTCAGGGG
mRNA sequenceShow/hide mRNA sequence
ACTTTTTGGGAGGGTAGGCATCGAATGGAGGCTCAGATGAGGCTTCATGCCTTGAGAATTGTGAGCAAAAGGATGCTGGATGGAACTGTGATATTTGTGGATGACAGTAA
TATGCATAGTATGGAGTTTTTTGACGAGATCCAGAATGTAAAGTGGTTTGGTGCTCTTTCTGTTGGAATCATTGTTCAGTTTGATAAACAAGATGAGTCTCTAGAGGAGG
TGGAGAACCCACCAATCTCTGCTCAGGGG
Protein sequenceShow/hide protein sequence
TFWEGRHRMEAQMRLHALRIVSKRMLDGTVIFVDDSNMHSMEFFDEIQNVKWFGALSVGIIVQFDKQDESLEEVENPPISAQG