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MS007161 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007161
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold25:1046544..1046939
RNA-Seq ExpressionMS007161
SyntenyMS007161
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598857.1 hypothetical protein SDJN03_08635, partial [Cucurbita argyrosperma subsp. sororia]3.2e-3666.9Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW +G Q YD D +DYSY PP QG               E+ Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSS
        TSTYRVGDRSGYTEYQ QER+R+VDFGS GS S     ++ S
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSS

KAG7029798.1 hypothetical protein SDJN02_08141, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-3666.44Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW +G Q YD D +DYSY PP QG               E+ Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKG--GNSNSSSSK
        TSTYRVGDRSGYTEYQ QER+R+VDFGS GS S    G++ S   K
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKG--GNSNSSSSK

XP_022157391.1 uncharacterized protein LOC111024099 [Momordica charantia]1.2e-5480.82Show/hide
Query:  SGKQLDQWSGNQYYDYDSNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS
        SGKQLDQWSG+Q YDYDS+DYSYDPPSQGYEIQP              S YE+SWRCHDRDR TGNY+TASTKEVASRGETFKERSTGRVGYKDEFKTTS
Subjt:  SGKQLDQWSGNQYYDYDSNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS

Query:  TYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSKKYIK
        T RVGDRSGYTEYQ QE YR+VDFGSSGSGSKGG SN SSSKKY+K
Subjt:  TYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSKKYIK

XP_022929740.1 uncharacterized protein LOC111436237 [Cucurbita moschata]4.9e-3770.68Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW +G Q YD D +DYSY PP QG               E+ Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGS
        TSTYRVGDRSGYTEYQ QER+R+VDFGS GS S
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGS

XP_022997473.1 uncharacterized protein LOC111492379 [Cucurbita maxima]6.8e-3968.06Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG---------------YEIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW SG Q YDYD +DYSY PPSQG                + Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG---------------YEIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSK
        TSTYRVGDRSGYTEYQ QER+R+VDFGS  S S  G++ S   K
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSK

TrEMBL top hitse value%identityAlignment
A0A5A7VGP1 Uncharacterized protein2.9e-3564.86Show/hide
Query:  KQLDQWSGN-QYYDYD-SNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS
        KQ+ ++ G  Q YDYD S+DYSY   +QG E+Q               SSYEQSWR HDR+R TG+Y T STK VASRGETFKERSTGRVG KDEFKTTS
Subjt:  KQLDQWSGN-QYYDYD-SNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS

Query:  TYRVGDRSGYTEYQCQERYRQVDFG--SSGSGSKGGNSNSSSSKKYIK
        TYRVGD+SGYTEYQCQER+R+VDFG  SSGSGSKGG  N     KY+K
Subjt:  TYRVGDRSGYTEYQCQERYRQVDFG--SSGSGSKGGNSNSSSSKKYIK

A0A5D3CHW8 Uncharacterized protein2.2e-3566.21Show/hide
Query:  KQLDQWSGN-QYYDYD-SNDYSYDPPSQ-----GY------EIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTSTYR
        KQ+ ++ G  Q YDYD S+DYSY+  S+     GY        Q SSYEQSWR HDR+R TG+Y T STK VASRGETFKERSTGRVG KDEFKTTSTYR
Subjt:  KQLDQWSGN-QYYDYD-SNDYSYDPPSQ-----GY------EIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTSTYR

Query:  VGDRSGYTEYQCQERYRQVDFG--SSGSGSKGGNSNSSSSKKYIK
        VGD+SGYTEYQCQER+R+VDFG  SSGSGSKGG  N     KY+K
Subjt:  VGDRSGYTEYQCQERYRQVDFG--SSGSGSKGGNSNSSSSKKYIK

A0A6J1DXX9 uncharacterized protein LOC1110240995.6e-5580.82Show/hide
Query:  SGKQLDQWSGNQYYDYDSNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS
        SGKQLDQWSG+Q YDYDS+DYSYDPPSQGYEIQP              S YE+SWRCHDRDR TGNY+TASTKEVASRGETFKERSTGRVGYKDEFKTTS
Subjt:  SGKQLDQWSGNQYYDYDSNDYSYDPPSQGYEIQP--------------SSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTS

Query:  TYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSKKYIK
        T RVGDRSGYTEYQ QE YR+VDFGSSGSGSKGG SN SSSKKY+K
Subjt:  TYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSKKYIK

A0A6J1EV61 uncharacterized protein LOC1114362372.4e-3770.68Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW +G Q YD D +DYSY PP QG               E+ Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG--------------YEI-QPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGS
        TSTYRVGDRSGYTEYQ QER+R+VDFGS GS S
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGS

A0A6J1KE05 uncharacterized protein LOC1114923793.3e-3968.06Show/hide
Query:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG---------------YEIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT
        SGKQLDQW SG Q YDYD +DYSY PPSQG                + Q SSYEQSWR HDR+R TG+Y TASTKEVASRGETFKERS+GRVG KDEFKT
Subjt:  SGKQLDQW-SGNQYYDYDSNDYSYDPPSQG---------------YEIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKT

Query:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSK
        TSTYRVGDRSGYTEYQ QER+R+VDFGS  S S  G++ S   K
Subjt:  TSTYRVGDRSGYTEYQCQERYRQVDFGSSGSGSKGGNSNSSSSK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCGGGAAAGCAGCTTGATCAATGGAGTGGGAACCAATATTATGACTATGATTCTAACGACTATTCATACGACCCTCCATCTCAAGGTTATGAGATTCAGCCAAGTAGCTA
TGAACAAAGCTGGAGGTGTCATGATCGTGACAGGACTACTGGAAACTATCAGACTGCCTCAACAAAGGAGGTTGCTTCTCGTGGGGAAACTTTCAAGGAGAGATCAACTG
GCAGAGTTGGCTACAAGGATGAATTCAAAACCACCTCTACTTACAGGGTCGGTGACCGAAGTGGATATACCGAGTATCAGTGCCAGGAGAGGTATCGGCAAGTTGATTTC
GGTAGCAGCGGATCGGGAAGTAAGGGGGGGAACAGCAACTCTTCATCAAGCAAGAAATATATTAAA
mRNA sequenceShow/hide mRNA sequence
TCGGGAAAGCAGCTTGATCAATGGAGTGGGAACCAATATTATGACTATGATTCTAACGACTATTCATACGACCCTCCATCTCAAGGTTATGAGATTCAGCCAAGTAGCTA
TGAACAAAGCTGGAGGTGTCATGATCGTGACAGGACTACTGGAAACTATCAGACTGCCTCAACAAAGGAGGTTGCTTCTCGTGGGGAAACTTTCAAGGAGAGATCAACTG
GCAGAGTTGGCTACAAGGATGAATTCAAAACCACCTCTACTTACAGGGTCGGTGACCGAAGTGGATATACCGAGTATCAGTGCCAGGAGAGGTATCGGCAAGTTGATTTC
GGTAGCAGCGGATCGGGAAGTAAGGGGGGGAACAGCAACTCTTCATCAAGCAAGAAATATATTAAA
Protein sequenceShow/hide protein sequence
SGKQLDQWSGNQYYDYDSNDYSYDPPSQGYEIQPSSYEQSWRCHDRDRTTGNYQTASTKEVASRGETFKERSTGRVGYKDEFKTTSTYRVGDRSGYTEYQCQERYRQVDF
GSSGSGSKGGNSNSSSSKKYIK