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MS007168 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007168
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein
Genome locationscaffold25:1126835..1127188
RNA-Seq ExpressionMS007168
SyntenyMS007168
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037964.1 F-box protein [Cucumis melo var. makuwa]1.9e-2449.14Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        LA+SNGLLLC +    P +HY V+NP+   L+ +PKP N+ ++VKIGF+S       DS  FT++R        +EI++SETG WRR+DL    D++F+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

KAG7036294.1 hypothetical protein SDJN02_03097, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-2956.03Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        +A+SNGLLLCG+S   PIV+Y VWNP  + L+ +PKP N+FT VKIGF+S       DS  FT++R G + L  +EI+SSETG WR +  + A DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

XP_022931048.1 F-box protein At1g52495-like [Cucurbita moschata]1.5e-2956.03Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        +A+SNGLLLCG+S   PIV+Y VWNP  + L+ +PKP N+FT VKIGF+S       DS  FT++R G + L  +EI+SSETG WR +  + A DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

XP_022996333.1 F-box protein At1g52495-like [Cucurbita maxima]1.1e-2956.03Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        +++SNGLLLCG+S   PIV+Y VWNPA + L+ +PKP N+FT VKIGF+S       DS  FT++R G + L  +EI+SSETG WR +  + A DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

XP_038888571.1 putative F-box protein At1g32420 [Benincasa hispida]7.0e-2752.59Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        LA+SNGLLLCG+    PI+HY V+NP+ + L+ +PKP N+  AVKIGF+S       +S  FT++R     +  +EI++SETG WRR+  D   DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+AAVL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

TrEMBL top hitse value%identityAlignment
A0A0A0L8X4 Uncharacterized protein1.2e-2449.14Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        LA+SNGLLLC +    PI+HY V+NP+   L+ +PKP N+ ++VKIGF+S       DS  FT++R        +EI++SETG WRR+D     D++F P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

A0A5A7T3C1 F-box protein9.2e-2549.14Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        LA+SNGLLLC +    P +HY V+NP+   L+ +PKP N+ ++VKIGF+S       DS  FT++R        +EI++SETG WRR+DL    D++F+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

A0A6J1EX93 F-box protein At1g52495-like7.3e-3056.03Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        +A+SNGLLLCG+S   PIV+Y VWNP  + L+ +PKP N+FT VKIGF+S       DS  FT++R G + L  +EI+SSETG WR +  + A DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

A0A6J1KAH8 F-box protein At1g52495-like5.6e-3056.03Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP
        +++SNGLLLCG+S   PIV+Y VWNPA + L+ +PKP N+FT VKIGF+S       DS  FT++R G + L  +EI+SSETG WR +  + A DSLF+P
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIP

Query:  AEGPAAAVLDGVFYWL
         EGP+A VL+GVFYWL
Subjt:  AEGPAAAVLDGVFYWL

A0A7J7HWW6 F-box domain-containing protein6.2e-1337.6Show/hide
Query:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSP--DSECFTVVRLG-------VMELLSLEIYSSETGVWRRVDLD
        +A+SNG LLC ++R+   + Y+++NPA      LPKP   + +V  GF    N   P  DS C+ VVR G       +  ++++E +SSETG W  V+L 
Subjt:  LAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSP--DSECFTVVRLG-------VMELLSLEIYSSETGVWRRVDLD

Query:  FAADSLFIPAEGPAAAVLDGVFYWL
                P   P A V+D VFYWL
Subjt:  FAADSLFIPAEGPAAAVLDGVFYWL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CACTTCCTCGCCGCCAGCAACGGCCTCCTCCTCTGCGGACGATCCCGCCACACCCCCATCGTTCACTACTTCGTCTGGAATCCCGCCGGCGACGTCCTCGTCTTCCTCCC
CAAACCGCTCAATGTCTTCACCGCCGTCAAAATCGGCTTTTACTCTGAGCTCAATTGCCGATCCCCCGATTCCGAGTGCTTCACCGTCGTGAGATTGGGGGTCATGGAGC
TTCTGTCGCTGGAAATTTACTCCTCCGAAACAGGGGTCTGGCGACGCGTGGATCTCGACTTCGCCGCCGATTCGCTGTTTATCCCCGCCGAAGGCCCCGCCGCGGCGGTT
CTCGACGGCGTGTTCTACTGGCTG
mRNA sequenceShow/hide mRNA sequence
CACTTCCTCGCCGCCAGCAACGGCCTCCTCCTCTGCGGACGATCCCGCCACACCCCCATCGTTCACTACTTCGTCTGGAATCCCGCCGGCGACGTCCTCGTCTTCCTCCC
CAAACCGCTCAATGTCTTCACCGCCGTCAAAATCGGCTTTTACTCTGAGCTCAATTGCCGATCCCCCGATTCCGAGTGCTTCACCGTCGTGAGATTGGGGGTCATGGAGC
TTCTGTCGCTGGAAATTTACTCCTCCGAAACAGGGGTCTGGCGACGCGTGGATCTCGACTTCGCCGCCGATTCGCTGTTTATCCCCGCCGAAGGCCCCGCCGCGGCGGTT
CTCGACGGCGTGTTCTACTGGCTG
Protein sequenceShow/hide protein sequence
HFLAASNGLLLCGRSRHTPIVHYFVWNPAGDVLVFLPKPLNVFTAVKIGFYSELNCRSPDSECFTVVRLGVMELLSLEIYSSETGVWRRVDLDFAADSLFIPAEGPAAAV
LDGVFYWL