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MS007172 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007172
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionATP synthase subunit alpha, chloroplastic
Genome locationscaffold25:1139078..1139365
RNA-Seq ExpressionMS007172
SyntenyMS007172
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0045261 - proton-transporting ATP synthase complex, catalytic core F(1) (cellular component)
GO:0005524 - ATP binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
GO:0046961 - proton-transporting ATPase activity, rotational mechanism (molecular function)
InterPro domainsIPR000194 - ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ATL62595.1 ATP synthase CF1 alpha subunit [Mostuea sp. Bremer et al. 5077]7.9e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

QVX30574.1 ATP synthase CF1 alpha subunit [Camoensia scandens]7.9e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

YP_009365902.1 ATP synthase CF1 alpha subunit [Jasminum tortuosum]7.9e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

YP_009532515.1 ATP synthase CF1 alpha subunit [Echinacanthus attenuatus]7.9e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

YP_009662603.1 ATP synthase CF1 alpha subunit [Amphilophium dolichoides]7.9e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

TrEMBL top hitse value%identityAlignment
A0A385NGR2 ATP synthase subunit alpha, chloroplastic3.8e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

A0A411DAV6 ATP synthase subunit alpha, chloroplastic3.8e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

A0A411DAW3 ATP synthase subunit alpha, chloroplastic3.8e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

A0A411DAW5 ATP synthase subunit alpha, chloroplastic3.8e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

A0A4D5Y104 ATP synthase subunit alpha, chloroplastic3.8e-3790.62Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

SwissProt top hitse value%identityAlignment
B1A920 ATP synthase subunit alpha, chloroplastic8.7e-3989.58Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQE G
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

B1NWD5 ATP synthase subunit alpha, chloroplastic8.7e-3989.58Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQE G
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

P08215 ATP synthase subunit alpha, chloroplastic3.9e-3989.58Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        ISTSESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N++CVYVAIGQKASSVAQVVTTLQE G
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

Q06RE6 ATP synthase subunit alpha, chloroplastic1.3e-3989.58Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGL+AIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVTTLQEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

Q3BAQ7 ATP synthase subunit alpha, chloroplastic6.7e-3988.54Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS+SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQ+G+N+ICVYVAIGQKASSVAQVVTT QEGG
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

Arabidopsis top hitse value%identityAlignment
AT2G07698.1 ATPase, F1 complex, alpha subunit protein1.6e-2454.37Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQ---------QGENIICVYVAIGQKASSVAQVVTT
        +S  E R +E  AP I+ R+SV++P+QTGL A+DS++P GRGQREL+IGDRQT KT +A  TILNQ         + E + CVYVAIGQK S+V Q++ T
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQ---------QGENIICVYVAIGQKASSVAQVVTT

Query:  LQE
        L+E
Subjt:  LQE

ATCG00120.1 ATP synthase subunit alpha1.8e-3988.54Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG
        IS SESRLIES AP IISRRSVY+PLQTGLIAIDSMIP GRGQRELIIGDRQT KTAVAT TILNQQG+N+ICVYVAIGQKASSVAQVVT+LQE G
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG

ATMG01190.1 ATP synthase subunit 11.1e-2353.4Show/hide
Query:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQ---------QGENIICVYVAIGQKASSVAQVVTT
        +S  E R +E  AP I+ R+SV++P+QTGL A+DS++P GRGQREL+IG RQT KT +A  TILNQ         + E + CVYVAIGQK S+V Q++ T
Subjt:  ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQ---------QGENIICVYVAIGQKASSVAQVVTT

Query:  LQE
        L+E
Subjt:  LQE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATTTCAACTTCTGAATCTCGATTAATTGAATCCACCGCTCCTAGTATTATTTCAAGACGTTCAGTATATAAGCCTCTTCAAACAGGACTTATTGCTATTGATTCGATGAT
TCCTACCGGACGTGGTCAGCGAGAATTAATTATTGGGGACAGGCAGACCGATAAAACTGCAGTAGCCACATATACGATTCTCAATCAACAAGGGGAAAATATAATATGTG
TTTATGTAGCTATTGGTCAAAAAGCATCTTCTGTAGCTCAAGTAGTGACTACTTTACAGGAGGGGGGG
mRNA sequenceShow/hide mRNA sequence
ATTTCAACTTCTGAATCTCGATTAATTGAATCCACCGCTCCTAGTATTATTTCAAGACGTTCAGTATATAAGCCTCTTCAAACAGGACTTATTGCTATTGATTCGATGAT
TCCTACCGGACGTGGTCAGCGAGAATTAATTATTGGGGACAGGCAGACCGATAAAACTGCAGTAGCCACATATACGATTCTCAATCAACAAGGGGAAAATATAATATGTG
TTTATGTAGCTATTGGTCAAAAAGCATCTTCTGTAGCTCAAGTAGTGACTACTTTACAGGAGGGGGGG
Protein sequenceShow/hide protein sequence
ISTSESRLIESTAPSIISRRSVYKPLQTGLIAIDSMIPTGRGQRELIIGDRQTDKTAVATYTILNQQGENIICVYVAIGQKASSVAQVVTTLQEGG