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MS007177 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007177
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold25:1192925..1193188
RNA-Seq ExpressionMS007177
SyntenyMS007177
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651649.1 hypothetical protein Csa_021260, partial [Cucumis sativus]4.6e-1558.49Show/hide
Query:  MRSIQSFRSRTRASSISHLK-ARKRRL------KHHSSA-----------AATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDL
        MRSI SFRSR +A++IS LK +R+RR+      KH SS+           +A  HKRLR+L+++V PG   HET+LNHLFQRTAD+I ALQLKLNILKDL
Subjt:  MRSIQSFRSRTRASSISHLK-ARKRRL------KHHSSA-----------AATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDL

Query:  TSLYGL
        TS YGL
Subjt:  TSLYGL

KAG6598843.1 Transcription factor UPBEAT1, partial [Cucurbita argyrosperma subsp. sororia]6.6e-1457.94Show/hide
Query:  MRSIQSFRSRTRASSISHLK-ARKRRLK-----------HHSSAAAT-------THKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKD
        MRSI SFR R +A+S ++LK  R+RRLK              SAAAT        HKRLR+L+++V PG   H+TDLNHLFQRTAD+I ALQLKLNILKD
Subjt:  MRSIQSFRSRTRASSISHLK-ARKRRLK-----------HHSSAAAT-------THKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKD

Query:  LTSLYGL
        LTS YGL
Subjt:  LTSLYGL

PON56043.1 hypothetical protein PanWU01x14_184020 [Parasponia andersonii]2.8e-0441.56Show/hide
Query:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG
        H+K R +        +K   +   TT K+LR L++I+ PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Subjt:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG

PON90720.1 hypothetical protein TorRG33x02_135770 [Trema orientale]3.6e-0441.56Show/hide
Query:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG
        H+K R +        ++   +A  TT K+LR L++I  PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Subjt:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG

TrEMBL top hitse value%identityAlignment
A0A0A0LJ57 Uncharacterized protein2.2e-1558.49Show/hide
Query:  MRSIQSFRSRTRASSISHLK-ARKRRL------KHHSSA-----------AATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDL
        MRSI SFRSR +A++IS LK +R+RR+      KH SS+           +A  HKRLR+L+++V PG   HET+LNHLFQRTAD+I ALQLKLNILKDL
Subjt:  MRSIQSFRSRTRASSISHLK-ARKRRL------KHHSSA-----------AATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDL

Query:  TSLYGL
        TS YGL
Subjt:  TSLYGL

A0A2P5C4Q7 Uncharacterized protein1.3e-0441.56Show/hide
Query:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG
        H+K R +        +K   +   TT K+LR L++I+ PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Subjt:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG

A0A2P5EYW3 Uncharacterized protein1.8e-0441.56Show/hide
Query:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG
        H+K R +        ++   +A  TT K+LR L++I  PG +  E +L  LFQ+TA+HIF L+ KLN+LK L++L+G
Subjt:  HLKARKR-------RLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTCCATCCAGTCCTTCCGATCAAGAACAAGAGCATCCTCCATTTCCCATCTCAAAGCAAGGAAGAGAAGGCTGAAGCATCACTCCTCCGCCGCCGCCACCACGCA
CAAGAGGCTCCGGGATCTCGAGAAGATCGTAATTCCTGGTCGCCGCCGCCACGAAACCGACCTCAACCACCTCTTCCAAAGAACTGCAGATCACATCTTCGCCTTGCAAC
TTAAGCTCAACATACTCAAGGATCTCACATCTCTCTATGGCCTC
mRNA sequenceShow/hide mRNA sequence
ATGAGGTCCATCCAGTCCTTCCGATCAAGAACAAGAGCATCCTCCATTTCCCATCTCAAAGCAAGGAAGAGAAGGCTGAAGCATCACTCCTCCGCCGCCGCCACCACGCA
CAAGAGGCTCCGGGATCTCGAGAAGATCGTAATTCCTGGTCGCCGCCGCCACGAAACCGACCTCAACCACCTCTTCCAAAGAACTGCAGATCACATCTTCGCCTTGCAAC
TTAAGCTCAACATACTCAAGGATCTCACATCTCTCTATGGCCTC
Protein sequenceShow/hide protein sequence
MRSIQSFRSRTRASSISHLKARKRRLKHHSSAAATTHKRLRDLEKIVIPGRRRHETDLNHLFQRTADHIFALQLKLNILKDLTSLYGL