; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007181 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007181
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionCytochrome c oxidase subunit
Genome locationscaffold25:1226112..1226805
RNA-Seq ExpressionMS007181
SyntenyMS007181
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598840.1 Cytochrome c oxidase subunit 6b-2, partial [Cucurbita argyrosperma subsp. sororia]5.7e-3894.74Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +++ELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022153389.1 cytochrome c oxidase subunit 6b-2 [Momordica charantia]1.5e-3897.37Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022929560.1 cytochrome c oxidase subunit 6b-2 [Cucurbita moschata]3.4e-3896.05Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_022937604.1 cytochrome c oxidase subunit 6b-2-like [Cucurbita moschata]3.4e-3896.05Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

XP_038889174.1 cytochrome c oxidase subunit 6b-2 isoform X1 [Benincasa hispida]2.0e-3896.1Show/hide
Query:  SSQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        S QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWV+KWNEQRENGTFPGPL
Subjt:  SSQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

TrEMBL top hitse value%identityAlignment
A0A6J0ZST6 Cytochrome c oxidase subunit3.6e-3896.05Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEES ECERFAKYYR+LCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1DIX3 Cytochrome c oxidase subunit7.3e-3997.37Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1EUQ5 Cytochrome c oxidase subunit1.6e-3896.05Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1FBN5 Cytochrome c oxidase subunit1.6e-3896.05Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

A0A6J1I3B0 Cytochrome c oxidase subunit3.6e-3894.74Show/hide
Query:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        ++IELKTAPADFRFPTTNQTRHCFTRYIEFHRCL+AKGEESGECERFAKYYRALCPGEWVEKWN+QRENGTFPGPL
Subjt:  SQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

SwissProt top hitse value%identityAlignment
O94581 Cytochrome c oxidase subunit 12, mitochondrial1.7e-2156Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        Q    T   D RFP TNQT+HCF  YI++ RC+ AKGE+   C++F   Y++LCP EWVE+W+EQRENGTFP P+
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

P14854 Cytochrome c oxidase subunit 6B16.8e-1851.35Show/hide
Query:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        KTAP D RFP  NQTR+C+  Y++FHRC   ++AKG +   CE + + Y++LCP  WV  W+EQR  GTFPG +
Subjt:  KTAPADFRFPTTNQTRHCFTRYIEFHRC---LSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q945L0 Cytochrome c oxidase subunit 6b-21.6e-3890.67Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGEES +CERFAKYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9S7L9 Cytochrome c oxidase subunit 6b-11.8e-3476Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC++AKG+++ EC++FAK+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Q9SUD3 Cytochrome c oxidase subunit 6b-34.5e-3889.33Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGE++ ECERFAKYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

Arabidopsis top hitse value%identityAlignment
AT1G22450.1 cytochrome C oxidase 6B1.3e-3576Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +I+L+TAPADFRFPTTNQTRHCFTRY+E+HRC++AKG+++ EC++FAK+YR+LCP EWV++WNEQRENGTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

AT1G32710.1 Cytochrome c oxidase, subunit Vib family protein1.3e-1139.68Show/hide
Query:  APADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEK-WNEQREN
        A  + RFP TN+TRHCF R++++H+C+   G ++ +C     Y R++CP E V K W +   N
Subjt:  APADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEK-WNEQREN

AT4G28060.1 Cytochrome c oxidase, subunit Vib family protein3.2e-3989.33Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGE++ ECERFAKYYRALCPGEWV+KWNEQRE GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL

AT5G57815.1 Cytochrome c oxidase, subunit Vib family protein1.1e-3990.67Show/hide
Query:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL
        +IELKTAPADFRFPTTNQTRHCFTRYIEFHRC +AKGEES +CERFAKYYRALCPGEWV+KWNEQRE+GTFPGPL
Subjt:  QIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCTCAGATAGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACAACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGTCAGC
CAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTATTACCGGGCCCTTTGCCCCGGTGAATGGGTTGAAAAATGGAATGAGCAGAGAGAGAACGGCACTTTCC
CTGGCCCTCTG
mRNA sequenceShow/hide mRNA sequence
TCATCTCAGATAGAGCTGAAAACAGCACCTGCTGACTTCCGATTCCCTACAACAAATCAAACCAGGCACTGTTTCACTCGTTACATTGAGTTCCACAGGTGCCTGTCAGC
CAAGGGTGAGGAGTCTGGTGAATGTGAAAGATTTGCAAAGTATTACCGGGCCCTTTGCCCCGGTGAATGGGTTGAAAAATGGAATGAGCAGAGAGAGAACGGCACTTTCC
CTGGCCCTCTG
Protein sequenceShow/hide protein sequence
SSQIELKTAPADFRFPTTNQTRHCFTRYIEFHRCLSAKGEESGECERFAKYYRALCPGEWVEKWNEQRENGTFPGPL