CuGenDBv2

Gene ID	MS007192
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	nuclear pore complex protein NUP43
Genome location	scaffold25:1314672..1316947
RNA-Seq Expression	MS007192
Synteny	MS007192
Gene Ontology terms	GO:0031080 - nuclear pore outer ring (cellular component) GO:0005515 - protein binding (molecular function)
InterPro domains	IPR015943 - WD40/YVTN repeat-like-containing domain superfamily IPR036322 - WD40-repeat-containing domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6586038.1 Nuclear pore complex protein NUP43, partial [Cucurbita argyrosperma subsp. sororia]

1.2e-191

92.88

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGT FAWDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022158135.1 nuclear pore complex protein NUP43 [Momordica charantia]

2.2e-206

99.72

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022937892.1 nuclear pore complex protein NUP43 [Cucurbita moschata]

5.4e-192

93.16

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_022969681.1 nuclear pore complex protein NUP43 [Cucurbita maxima]

7.3e-189

91.45

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKY+DGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK SN SPCESEVWEV YDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

XP_023538014.1 nuclear pore complex protein NUP43 [Cucurbita pepo subsp. pepo]

4.5e-191

92.88

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSRVSSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDIDRQ PSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

TrEMBL top hits

e value

%identity

Alignment

A0A1S3BTA6 nuclear pore complex protein NUP43

3.6e-186

90.86

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAF RFAVIA FDSD DSSSIEIHS+TQN LDIAPHSTW+SPSRVSSLKTSQ +QNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPM+ASLDSEL+VPEK LHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY + KWASPTEF TGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLE +K SN SPCESEVWEVHYDPYIKS N+GGMSS+QILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        DGILTS+EQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A5D3BAS9 Nuclear pore complex protein NUP43

3.6e-186

90.86

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAF RFAVIA FDSD DSSSIEIHS+TQN LDIAPHSTW+SPSRVSSLKTSQ +QNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPM+ASLDSEL+VPEK LHDGPISCVDVMD GGECLTV+EDGRVNLVSVGESGLNYRRIFDSNGLVSY + KWASPTEF TGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFK DWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLR QQQPIILSGLE +K SN SPCESEVWEVHYDPYIKS N+GGMSS+QILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
        DGILTS+EQGK+PVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSR

A0A6J1DUZ0 nuclear pore complex protein NUP43

1.1e-206

99.72

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1FCG9 nuclear pore complex protein NUP43

2.6e-192

93.16

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKYVDGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK SN SPCESEVWEVHYDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

A0A6J1HYH3 nuclear pore complex protein NUP43

3.5e-189

91.45

Show/hide

Query:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH
        MAI+SP QQQPQIHRFP FKY+DGVRWLP LSAFGRFAV+A FDSDSDSSSIEIHS+TQN LD+AP S W SPSR+SSLKTSQ YQNPLVFASTYTGSLH
Subjt:  MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLH

Query:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP
        VLSVEPMDASLDSEL+VPEK LHD PISCVDVMD GGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYT+AKWASPTEFATGGCGFSLQWWDQRKP
Subjt:  VLSVEPMDASLDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKP

Query:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE
        GGAV QFKGDWASGIVHC+DIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLE SK SN SPCESEVWEV YDPYIKS NIGGMSSSQILPAMICSE
Subjt:  GGAVSQFKGDWASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSE

Query:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        DGI+TS+EQGKQPVELLAEPCAINGFDID QHPSEVICNLEWESVAILSRP
Subjt:  DGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

SwissProt top hits

e value

%identity

Alignment

Q24JJ9 Nuclear pore complex protein NUP43

3.5e-109

57.46

Show/hide

Query:  QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD-------IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTY
        Q   Q+HR P  KYVDGVRWLP  SA  RF   A++D+D DSSSIEI S+  N          I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD-------IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTY

Query:  TGSLHVLSVEPMDASLDSELTVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQ
        +GSLHVL ++ ++ +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y + KWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMDASLDSELTVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS

Query:  SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  +EQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Arabidopsis top hits

e value

%identity

Alignment

AT4G30840.1 Transducin/WD40 repeat-like superfamily protein

2.5e-110

57.46

Show/hide

Query:  QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD-------IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTY
        Q   Q+HR P  KYVDGVRWLP  SA  RF   A++D+D DSSSIEI S+  N          I   S+W SPSRVSSL+ +          P+V A+T 
Subjt:  QQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLD-------IAPHSTWISPSRVSSLKTSQT-----YQNPLVFASTY

Query:  TGSLHVLSVEPMDASLDSELTVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQ
        +GSLHVL ++ ++ +   E    E +  H G +  VD  + GGEC+TV EDGRVN+V  V   GL YR++FD NGLV+Y + KWASPTEF TGG GF LQ
Subjt:  TGSLHVLSVEPMDASLDSELTVPE-KTLHDGPISCVDVMDGGGECLTVAEDGRVNLVS-VGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQ

Query:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS
         WDQRK G AVSQ KG+W     S IVH IDIHPSRKHTC+AGGS GTVFAWDLRW QQPI+LSG+  S+  N    ESEVWEV YD Y KS     +SS
Subjt:  WWDQRKPGGAVSQFKGDW----ASGIVHCIDIHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSS

Query:  SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP
        S+ILP M CSEDGIL  +EQG++P+ELLAEPCAIN FDIDRQ+P +VIC+LEWES+A+ SRP
Subjt:  SQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDRQHPSEVICNLEWESVAILSRP

Sequences

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CDS sequence

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ATGGCGATCATAAGCCCCCAGCAGCAGCAACCTCAAATCCACAGATTCCCGCTATTCAAGTACGTCGATGGCGTTCGGTGGCTTCCATCGCTCTCCGCATTTGGTCGCTT
TGCTGTCATTGCCACTTTTGACTCCGATTCCGACTCATCCTCCATTGAAATTCACTCCGTGACTCAAAATCTGCTGGATATAGCTCCTCATTCGACTTGGATATCACCTT
CAAGAGTCTCTTCCCTTAAAACCTCTCAGACCTACCAAAACCCTCTCGTTTTTGCTTCGACTTATACAGGTTCTCTTCATGTTTTGTCTGTCGAGCCGATGGATGCGTCG
CTCGATTCGGAGCTCACGGTACCCGAGAAGACGTTGCACGACGGACCAATTTCTTGCGTCGATGTGATGGATGGCGGCGGTGAATGTCTGACTGTTGCGGAAGATGGGCG
GGTGAATTTAGTGAGCGTTGGGGAATCTGGATTGAATTATCGTCGGATATTCGATAGTAATGGGTTGGTGTCGTATACTTCAGCGAAATGGGCATCGCCTACTGAGTTTG
CGACTGGAGGTTGTGGGTTTAGCTTGCAATGGTGGGATCAGAGGAAGCCCGGGGGAGCAGTTTCTCAGTTTAAGGGCGACTGGGCTTCTGGTATTGTTCACTGCATTGAC
ATCCATCCTTCGCGAAAGCATACCTGTTTGGCAGGAGGCTCTTTTGGAACTGTTTTTGCCTGGGATTTGAGGTGGCAACAGCAGCCTATTATTCTTTCGGGTCTAGAAAG
GAGCAAAGCTTCAAATCTTTCGCCATGTGAAAGTGAGGTTTGGGAGGTTCACTATGATCCATATATAAAGTCTTGCAATATAGGTGGCATGTCATCTTCGCAGATTTTAC
CTGCCATGATTTGCTCTGAGGATGGGATTTTGACTAGTGTCGAGCAAGGCAAGCAGCCTGTGGAATTGCTGGCGGAACCTTGTGCAATTAATGGTTTTGACATTGATCGT
CAACACCCATCAGAAGTGATATGTAACTTGGAGTGGGAATCCGTGGCCATTCTGTCAAGACCC

mRNA sequence

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Protein sequence

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MAIISPQQQQPQIHRFPLFKYVDGVRWLPSLSAFGRFAVIATFDSDSDSSSIEIHSVTQNLLDIAPHSTWISPSRVSSLKTSQTYQNPLVFASTYTGSLHVLSVEPMDAS
LDSELTVPEKTLHDGPISCVDVMDGGGECLTVAEDGRVNLVSVGESGLNYRRIFDSNGLVSYTSAKWASPTEFATGGCGFSLQWWDQRKPGGAVSQFKGDWASGIVHCID
IHPSRKHTCLAGGSFGTVFAWDLRWQQQPIILSGLERSKASNLSPCESEVWEVHYDPYIKSCNIGGMSSSQILPAMICSEDGILTSVEQGKQPVELLAEPCAINGFDIDR
QHPSEVICNLEWESVAILSRP

MS007192 (gene) of Bitter gourd (TR) v1 genome