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MS007195 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007195
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold25:1340353..1340514
RNA-Seq ExpressionMS007195
SyntenyMS007195
Gene Ontology termsGO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5472161.1 hypothetical protein F2P56_008900 [Juglans regia]3.2e-1166.04Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN +LLAKQGWRIIT P SLA+RVLK KYF +S F  A  KRNDS++W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
XP_018835827.1 uncharacterized protein LOC109002494 [Juglans regia]3.2e-1167.92Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN ALLAKQGWRIIT P SLA+RVLK KYF +S F  A  KR DSF+W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
XP_035546536.1 uncharacterized protein LOC118348603 [Juglans regia]4.2e-1166.04Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN  LLAKQGWRIIT P SLA+RVLK KYF +S F  A  KRNDS++W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
XP_038695493.1 uncharacterized protein LOC119992773 [Tripterygium wilfordii]9.3e-1164.15Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        +SFN ALLAKQGWRIIT P+SL++R+LK KYF+NS FL  +  RN S++W SL
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
XP_042954620.1 uncharacterized protein LOC122291035 [Carya illinoinensis]1.6e-1071.15Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRS
        E FN ALLAKQGWRII  P SLAA+VLK KYF  SSFL A  K +DSF+WRS
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRS
TrEMBL top hitse value%identityAlignment
A0A2I4FII3 uncharacterized protein LOC1089991131.0e-1066.04Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN ALLAKQGWRIIT P SLA+RVLK KYF  S F  A  KR+DS++W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
A0A2I4FW02 uncharacterized protein LOC1090024941.5e-1167.92Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN ALLAKQGWRIIT P SLA+RVLK KYF +S F  A  KR DSF+W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
A0A2K3MXM6 Ribonuclease H (Fragment)1.7e-1062.96Show/hide
Query:  MESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        + +FN ALLAKQGWR+ITKP SL A+VLK KYF N SFL A +K+  S+ WRS+
Subjt:  MESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
A0A2N9HB41 Uncharacterized protein7.7e-1166.67Show/hide
Query:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        FN A+LA+QGWR++  PNSL +RVLK KY+ N SFLEAS K N SFIWRS+
Subjt:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
A0A6P9EGR3 uncharacterized protein LOC1183486032.0e-1166.04Show/hide
Query:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        E FN  LLAKQGWRIIT P SLA+RVLK KYF +S F  A  KRNDS++W+S+
Subjt:  ESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003103.8e-0749.02Show/hide
Query:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        FN ALLAKQ +RII +P++L +R+L+ +YF +SS +E S     S+ WRS+
Subjt:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein9.3e-0946.3Show/hide
Query:  MESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        +E+FN ALL KQ WR++++P SL A+V K +YF  S  L A      SF+W+S+
Subjt:  MESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.7e-0849.02Show/hide
Query:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL
        FN ALLAKQ +RII +P++L +R+L+ +YF +SS +E S     S+ WRS+
Subjt:  FNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAGCTTTAACCCAGCCCTATTGGCAAAACAAGGATGGAGAATTATTACTAAACCCAACTCTTTGGCAGCTAGAGTCCTTAAATGCAAATATTTTAGGAATTCATC
CTTTCTTGAGGCATCTTATAAGCGAAATGATTCTTTCATATGGAGAAGTCTT
mRNA sequenceShow/hide mRNA sequence
ATGGAAAGCTTTAACCCAGCCCTATTGGCAAAACAAGGATGGAGAATTATTACTAAACCCAACTCTTTGGCAGCTAGAGTCCTTAAATGCAAATATTTTAGGAATTCATC
CTTTCTTGAGGCATCTTATAAGCGAAATGATTCTTTCATATGGAGAAGTCTT
Protein sequenceShow/hide protein sequence
MESFNPALLAKQGWRIITKPNSLAARVLKCKYFRNSSFLEASYKRNDSFIWRSL