; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007200 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007200
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUbiquitin-like domain-containing protein
Genome locationscaffold25:1395095..1395710
RNA-Seq ExpressionMS007200
SyntenyMS007200
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR000626 - Ubiquitin-like domain
IPR029071 - Ubiquitin-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7020821.1 hypothetical protein SDJN02_17509 [Cucurbita argyrosperma subsp. argyrosperma]4.6e-4390.2Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLILVGSGEVLED+KTLADQKVENDAVVALTLRKDDNEFEEINIV  ++FYQSR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_008452565.1 PREDICTED: uncharacterized protein LOC103493547 isoform X1 [Cucumis melo]2.7e-4389.22Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLIL+GSGEVLED+KTLADQKVENDAVVALTLRK+DN+FEEINIV P++FYQSRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_022158170.1 uncharacterized protein LOC111024713 isoform X1 [Momordica charantia]2.1e-48100Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

XP_022158171.1 uncharacterized protein LOC111024713 isoform X2 [Momordica charantia]6.2e-48100Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN

Query:  W
        W
Subjt:  W

XP_038889494.1 uncharacterized protein LOC120079401 isoform X2 [Benincasa hispida]3.5e-4388.24Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLILVGSGEVLED+KTLADQKVENDAVVALTLRKDDN+FEEI+I++P++FYQSRDAD+G
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

TrEMBL top hitse value%identityAlignment
A0A1S3BTJ1 uncharacterized protein LOC103493547 isoform X11.3e-4389.22Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLIL+GSGEVLED+KTLADQKVENDAVVALTLRK+DN+FEEINIV P++FYQSRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

A0A5A7UM04 Ubiquitin3.8e-4389.11Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLIL+GSGEVLED+KTLADQKVENDAVVALTLRK+DN+FEEINIV P++FYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1DV27 uncharacterized protein LOC111024713 isoform X11.0e-48100Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

A0A6J1E077 uncharacterized protein LOC111024713 isoform X23.0e-48100Show/hide
Query:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN
        MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN
Subjt:  MYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGN

Query:  W
        W
Subjt:  W

A0A6J1HY58 uncharacterized protein LOC1114685518.4e-4389.22Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG
        AMYIRIKRHKTTYFIQCDPIETTL+IKQKL +LIDQP+VDQRLILVGSGEVLED+KTLADQKVENDAVVALTLRKDDNEFEEI+IV  ++FYQSR+ADSG
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSG

Query:  NW
        NW
Subjt:  NW

SwissProt top hitse value%identityAlignment
P16709 viral Ubiquitin5.7e-0438.1Show/hide
Query:  TYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLR
        T   + +P ET  D+KQK+A     P+  QRLI   +G+ LED+KT+AD  ++ ++ + + LR
Subjt:  TYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLR

Arabidopsis top hitse value%identityAlignment
AT5G57860.1 Ubiquitin-like superfamily protein7.8e-3372.53Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF
        AMYIR+KR KTTYFIQCDP ET LD+KQKL  LI+QP+ +QRL+L+ + EVLED+K+LADQKVENDAVVALTL+KDDNEFE++NI +P +F
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF

AT5G57860.2 Ubiquitin-like superfamily protein7.8e-3372.53Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF
        AMYIR+KR KTTYFIQCDP ET LD+KQKL  LI+QP+ +QRL+L+ + EVLED+K+LADQKVENDAVVALTL+KDDNEFE++NI +P +F
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF

AT5G57860.3 Ubiquitin-like superfamily protein7.8e-3372.53Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF
        AMYIR+KR KTTYFIQCDP ET LD+KQKL  LI+QP+ +QRL+L+ + EVLED+K+LADQKVENDAVVALTL+KDDNEFE++NI +P +F
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEF

AT5G57860.4 Ubiquitin-like superfamily protein9.9e-2069.23Show/hide
Query:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVEN
        AMYIR+KR KTTYFIQCDP ET LD+KQKL  LI+QP+ +QRL+L+ + EVLED+K+LADQKV +
Subjt:  AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCCATGTATATCCGAATCAAGCGCCATAAGACTACCTACTTTATCCAGTGTGATCCAATTGAGACGACTTTAGATATCAAGCAAAAATTGGCAACCCTTATTGATCAACC
ATTAGTTGATCAACGCTTGATCCTGGTGGGGAGTGGGGAAGTATTGGAAGATACAAAGACACTGGCTGATCAGAAGGTTGAAAACGATGCAGTTGTGGCTCTAACGTTGC
GAAAAGATGATAACGAGTTCGAGGAGATTAACATTGTCCGGCCAGACGAGTTCTACCAATCTCGTGATGCTGATTCTGGAAATTGG
mRNA sequenceShow/hide mRNA sequence
GCCATGTATATCCGAATCAAGCGCCATAAGACTACCTACTTTATCCAGTGTGATCCAATTGAGACGACTTTAGATATCAAGCAAAAATTGGCAACCCTTATTGATCAACC
ATTAGTTGATCAACGCTTGATCCTGGTGGGGAGTGGGGAAGTATTGGAAGATACAAAGACACTGGCTGATCAGAAGGTTGAAAACGATGCAGTTGTGGCTCTAACGTTGC
GAAAAGATGATAACGAGTTCGAGGAGATTAACATTGTCCGGCCAGACGAGTTCTACCAATCTCGTGATGCTGATTCTGGAAATTGG
Protein sequenceShow/hide protein sequence
AMYIRIKRHKTTYFIQCDPIETTLDIKQKLATLIDQPLVDQRLILVGSGEVLEDTKTLADQKVENDAVVALTLRKDDNEFEEINIVRPDEFYQSRDADSGNW