; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007203 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007203
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionTranslation initiation factor IF-3
Genome locationscaffold25:1426436..1429883
RNA-Seq ExpressionMS007203
SyntenyMS007203
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0032790 - ribosome disassembly (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0043022 - ribosome binding (molecular function)
InterPro domainsIPR001288 - Translation initiation factor 3
IPR019814 - Translation initiation factor 3, N-terminal
IPR019815 - Translation initiation factor 3, C-terminal
IPR036787 - Translation initiation factor 3 (IF-3), N-terminal domain superfamily
IPR036788 - Translation initiation factor 3 (IF-3), C-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144726.1 translation initiation factor IF3-4, chloroplastic [Cucumis sativus]2.3e-10272.58Show/hide
Query:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQ SA   TTSS++A+   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYN                              YNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_008452687.1 PREDICTED: translation initiation factor IF-3 [Cucumis melo]8.3e-10576Show/hide
Query:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPA
        MAGL+  FPFK LLSQ SA   TTS AAA +SSSS     PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP 
Subjt:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPA

Query:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YN
        DSKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                              YN
Subjt:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YN

Query:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        IDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_022158178.1 translation initiation factor IF3-4, chloroplastic [Momordica charantia]2.2e-12689.04Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLTSRFPFKPLLSQ SATTSSAAA SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV
        FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                              YNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_022969585.1 translation initiation factor IF3-4, chloroplastic-like [Cucurbita maxima]1.0e-9971.58Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLT RFPFKPLLS  SAT +++AA+ SSS+ A A P RTSISPLPLSSS+ NAF FR HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+                              YNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ+EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

XP_038891171.1 translation initiation factor IF3-4, chloroplastic [Benincasa hispida]1.9e-10978.52Show/hide
Query:  MAGLTSRFPFKPLLSQ-PSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSK
        MAGL+ RFPFKPLLSQ  +ATT+SAAA++SSSSA    PFRTSI PLPLSSS++NAF FRL  SNSLRL+    VSSPIR SVF+R+GGAPRSSGPADSK
Subjt:  MAGLTSRFPFKPLLSQ-PSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPADSK

Query:  RSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQ
        RSDD+FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                              YNIDQ
Subjt:  RSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQ

Query:  HDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSAGV
        HDYSVRL+AA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+EIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE PPKKKD PA+NEVSAGV
Subjt:  HDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSAGV

TrEMBL top hitse value%identityAlignment
A0A0A0LH34 Translation initiation factor IF-31.1e-10272.58Show/hide
Query:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD
        MAGL+  FPFK LLSQ SA   TTSS++A+   +S+++  PFRTS   LP+SSS SNAF FRLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP D
Subjt:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPAD

Query:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNI
        SKRS+D+ GLD+SAI+S NVRLIDA+QNMVG+VSKAQAIQMAEDAELDLVV+SPDADPPVVRIMDYN                              YNI
Subjt:  SKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNI

Query:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        DQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+N VSA V
Subjt:  DQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A1S3BV82 Translation initiation factor IF-34.0e-10576Show/hide
Query:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPA
        MAGL+  FPFK LLSQ SA   TTS AAA +SSSS     PFRTS   LP+SSS  SNAF  RLH SNSLRL+    VSSPIR SVFAR GGAPRSSGP 
Subjt:  MAGLTSRFPFKPLLSQPSA---TTSSAAASSSSSSAAAAPPFRTSISPLPLSSS-ESNAFGFRLHNSNSLRLI----VSSPIRRSVFARFGGAPRSSGPA

Query:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YN
        DSKRS+D+FGLDVSAIRSNNVRLIDAQQNMVG+VSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                              YN
Subjt:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YN

Query:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        IDQHDYSVRLKAA++FLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQ+E+GELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKD PA+NEVSAGV
Subjt:  IDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A6J1DYM5 Translation initiation factor IF-31.1e-12689.04Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLTSRFPFKPLLSQ SATTSSAAA SSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV
        FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN                              YNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

A0A6J1G3Y5 Translation initiation factor IF-31.1e-9972.35Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGL+ RFPFK + SQ SAT ++   +SSSSSA    PFRTSI PLPL SS+SNAF FRLHNSNSLRL VSSPIR SVFAR+GGAPRSSGPA SKRS+D 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV
          LDVS+IRSNNVRLID QQNMVGIV K+QAIQMAEDAELDLVVLSPDADPPVVRIMDY+                              Y IDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNP-AINEVSAGV
        RL+AA++FL+DGDKVKVIVNLKGRENEFR IAIEL++RFQ+E+GELATEEAKNFRDRN+FIVL PNKAVLQK+QEPPKKKD P A+NEVSA V
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNP-AINEVSAGV

A0A6J1I0C0 Translation initiation factor IF-35.1e-10071.58Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD
        MAGLT RFPFKPLLS  SAT +++AA+ SSS+ A A P RTSISPLPLSSS+ NAF FR HNSNSL L+ ++  R +V +++GGA RSSGPADSKR DD 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDD

Query:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV
         G+D+SAIRSN VRLIDAQQNMVGIVSK QAIQMA+DAELDLVVLSPDADPPVVRIMDY+                              YNIDQHDYSV
Subjt:  FGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN------------------------------YNIDQHDYSV

Query:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV
        RLKAAR+FLKDGDKVKVIVNLKGREN F+NIAIELIRRFQ+EIGELATEEAKN RDRN+FIVL PNKAVLQKAQEPPK KDN  +NEVSA V
Subjt:  RLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV

SwissProt top hitse value%identityAlignment
B0JKQ1 Translation initiation factor IF-31.6e-2135.63Show/hide
Query:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDY----------------------------NYNID
        D +R+  D       IR   +R+ID+  + +GI++ A+A+++AE+ ELDLV++S  A PPV RIMDY                             Y ID
Subjt:  DSKRSDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDY----------------------------NYNID

Query:  QHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK
        +HDY+VR+  A+RFLK GDKVK  +  +GRE +  N+A EL+ R   ++ ++A  ++A     RN+ ++L P K
Subjt:  QHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK

O82234 Translation initiation factor IF3-2, chloroplastic5.1e-5749.49Show/hide
Query:  MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKR
        MAG+T S   F  + +  + T SS +  S  S   +    +T +S   L+ S   AF                      F   GG  R SG       K 
Subjt:  MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY
        ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+                            YNIDQHDY
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY

Query:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA
        SVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Subjt:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA

Q0IDZ5 Translation initiation factor IF-31.7e-2037.36Show/hide
Query:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDY----------------------------NYNIDQHDYSVRLKAARRFLKDGDK
        +R++DA    +G++ + QA+++A + ELDLV++S  ADPPV RIMDY                             Y IDQHDY VR+  A+RFLK GDK
Subjt:  VRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDY----------------------------NYNIDQHDYSVRLKAARRFLKDGDK

Query:  VKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDNPAINE
        VK  V  +GRE +   +A  L+RR   ++ E A  +    R+ RN+ + L P KA L K     K KD   +N+
Subjt:  VKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRD-RNIFIVLVPNKAVLQKAQEPPKKKDNPAINE

Q8R9C2 Translation initiation factor IF-31.7e-2037.11Show/hide
Query:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMD---YNY-------------------------NIDQHDYSVRLKAARRFL
        IR   VRLID     +GI+S  +A ++A++  LDLV + P+A+PPV ++MD   Y Y                         NI+ HD+ V+LK+A +FL
Subjt:  IRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMD---YNY-------------------------NIDQHDYSVRLKAARRFL

Query:  KDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK
        KDGDKVKV +  +GRE    ++A +L++RF +E+ E    E+A +   RN+ +V+ P K
Subjt:  KDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELA-TEEAKNFRDRNIFIVLVPNK

Q94B52 Translation initiation factor IF3-4, chloroplastic4.9e-6051.19Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR
        MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R                       GG   S  P D     K 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY
        S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                            YNIDQHDY
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY

Query:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        SVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA

Arabidopsis top hitse value%identityAlignment
AT2G24060.1 Translation initiation factor 3 protein3.6e-5849.49Show/hide
Query:  MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKR
        MAG+T S   F  + +  + T SS +  S  S   +    +T +S   L+ S   AF                      F   GG  R SG       K 
Subjt:  MAGLT-SRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGP---ADSKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY
        ++ D  LD+S+IRS  VRLID QQNM+G+VSK +A++MA+DAELDLV+LSPDADPPVV++MDY+                            YNIDQHDY
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY

Query:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA
        SVRL+AA++FL+DGDKVKVIV++KGRENEFRNIAIEL+RRFQ EIGELATEE+KNFRDRN+FI+LVPNK +++K QEPP +KK   A NE SA
Subjt:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQEPP-KKKDNPAINEVSA

AT4G30690.1 Translation initiation factor 3 protein3.5e-6151.19Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR
        MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R                       GG   S  P D     K 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY
        S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+                            YNIDQHDY
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYN----------------------------YNIDQHDY

Query:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        SVR++AAR+FL+DGDKVKVIVN+KGRENEFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  SVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA

AT4G30690.2 Translation initiation factor 3 protein1.1e-6556.6Show/hide
Query:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR
        MAG+TS   F  +L+  + T S    S         P F + +S  P       A   R                       GG   S  P D     K 
Subjt:  MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPAD----SKR

Query:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGREN
        S+DD  LD+SAIRS  VRLID QQNM+G+VSK +A++ AEDAELDLV+LSPDADPPVVR+MDY+YNIDQHDYSVR++AAR+FL+DGDKVKVIVN+KGREN
Subjt:  SDDDFGLDVSAIRSNNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGREN

Query:  EFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA
        EFRNIAIEL+RRFQ EIGEL TEE+KNFRDRN+FIVLVPNK V++K QE PPKKK  PA ++VSA
Subjt:  EFRNIAIELIRRFQDEIGELATEEAKNFRDRNIFIVLVPNKAVLQKAQE-PPKKKDNPAINEVSA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAACCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCC
TCCCTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAA
TTCGTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCTGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCA
AATAATGTGAGACTTATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACC
CGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACA
AGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAG
GCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGA
AGTTTCGGCTGGTGTT
mRNA sequenceShow/hide mRNA sequence
ATGGCTGGGCTCACCAGCAGATTCCCTTTCAAACCTCTCTTATCCCAACCCTCCGCCACCACCTCCTCCGCCGCCGCCTCCTCCTCTTCCTCCTCCGCCGCCGCCGCTCC
TCCCTTCCGAACCTCAATTTCCCCTCTCCCTCTCTCCTCCTCTGAATCCAATGCCTTCGGATTCCGCCTTCACAACTCCAATTCTCTGCGTCTTATCGTCTCCTCTCCAA
TTCGTCGCTCTGTATTTGCTCGATTCGGCGGTGCTCCTCGATCTTCAGGACCTGCGGATTCTAAGCGCTCTGACGATGATTTTGGTCTCGATGTTTCCGCCATCAGGTCA
AATAATGTGAGACTTATTGATGCACAACAGAACATGGTTGGAATCGTGTCAAAGGCCCAGGCCATTCAAATGGCTGAAGACGCTGAACTTGATTTGGTTGTATTATCACC
CGATGCAGATCCTCCAGTTGTCAGAATAATGGATTACAATTATAACATTGACCAACATGATTACTCTGTTCGTTTGAAAGCTGCAAGGAGGTTTTTGAAGGATGGGGACA
AGGTTAAAGTTATAGTGAACTTGAAAGGTCGTGAGAATGAGTTCAGAAATATAGCAATTGAGCTCATCAGACGTTTCCAGGATGAGATTGGGGAGCTTGCAACTGAAGAG
GCCAAGAACTTCAGAGACAGGAATATATTTATTGTTCTAGTTCCTAACAAGGCTGTTCTACAGAAGGCTCAAGAACCCCCCAAGAAAAAGGACAATCCCGCCATAAATGA
AGTTTCGGCTGGTGTT
Protein sequenceShow/hide protein sequence
MAGLTSRFPFKPLLSQPSATTSSAAASSSSSSAAAAPPFRTSISPLPLSSSESNAFGFRLHNSNSLRLIVSSPIRRSVFARFGGAPRSSGPADSKRSDDDFGLDVSAIRS
NNVRLIDAQQNMVGIVSKAQAIQMAEDAELDLVVLSPDADPPVVRIMDYNYNIDQHDYSVRLKAARRFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQDEIGELATEE
AKNFRDRNIFIVLVPNKAVLQKAQEPPKKKDNPAINEVSAGV