; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007205 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007205
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionF-box protein
Genome locationscaffold25:1435225..1436736
RNA-Seq ExpressionMS007205
SyntenyMS007205
Gene Ontology termsGO:0031146 - SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (biological process)
GO:0019005 - SCF ubiquitin ligase complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR006553 - Leucine-rich repeat, cysteine-containing subtype
IPR032675 - Leucine-rich repeat domain superfamily
IPR036047 - F-box-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599142.1 F-box protein SKIP1, partial [Cucurbita argyrosperma subsp. sororia]4.7e-15286.53Show/hide
Query:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL
        A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PTESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD 
Subjt:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL

Query:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA
        SL LV Q CPNLEVLSIKSC NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ  GIVP+ YLNACPQDVDSEA
Subjt:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
         AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

XP_022158176.1 F-box protein SKIP1-like [Momordica charantia]7.2e-17799.34Show/hide
Query:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
        MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAAT SSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
Subjt:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR

Query:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
        IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
Subjt:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
        QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSR+IANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD

Query:  VFRI
        VFRI
Subjt:  VFRI

XP_022946543.1 F-box protein SKIP1-like [Cucurbita moschata]1.0e-15186.2Show/hide
Query:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL
        A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PTESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD 
Subjt:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL

Query:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA
        SL LV Q CPNLEVLSIKSC NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ  GIVP+ YLNACPQDVDSEA
Subjt:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
         AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

XP_022999743.1 F-box protein SKIP1-like [Cucurbita maxima]2.3e-15186.2Show/hide
Query:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL
        A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDL+PRFDS PTESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD 
Subjt:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL

Query:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA
        SL LV Q CPNLEVLSIKSC NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ  GIVP+ YLNACPQDVDSEA
Subjt:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
         AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

XP_038890479.1 F-box protein SKIP1 [Benincasa hispida]1.4e-15186.58Show/hide
Query:  SASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSD
        S S +WAELTHECLTNI+SRL++EQRWRGPMLVCKLW RAATD SLFS FDLEPRF+S PTESPAWWSPEF+TKIDSMLRS + WS GSLSLIRIRHCSD
Subjt:  SASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSD

Query:  LSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSE
         SL  V Q CPNLEVLSIKSC NVTD+SMAKIALGCQKLREVDISYC+EIS+ SLALIG+HCPNIKT+KRNFFN LDPSQH GIVP++YLN+CPQDVDSE
Subjt:  LSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSE

Query:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
        AAAIAKFMPNLEHLEL FSKL+AKALSLICEGCP LK+LDLFGCVNLTSRDIANAT+S+ENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

TrEMBL top hitse value%identityAlignment
A0A1S3BUE6 F-box protein SKIP19.0e-14984.54Show/hide
Query:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
        M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA D SLFS FDLEPRF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR
Subjt:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR

Query:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
        +RHCSD SL  V Q CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN LDPSQH GIVP++YL+ACP
Subjt:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
        QDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD

Query:  VFRI
        +FRI
Subjt:  VFRI

A0A5D3BD72 F-box protein SKIP19.0e-14984.54Show/hide
Query:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
        M +PS S S +WAELTHECLTNI+SRL++EQRWRGPMLVCK WFRAA D SLFS FDLEPRF+SAPTESPAWW PEF+TKIDSMLRS + WS GSLS+IR
Subjt:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR

Query:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
        +RHCSD SL  V Q CPNLEVLSIKSC NVTD SMAKIA GCQKLREVDISYC+EIS+ SLALIGRHCPNIKTLKRN+FN LDPSQH GIVP++YL+ACP
Subjt:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
        QDVDSEAAAIAKFM NLEHLEL FSKL+AKAL+ ICEGCPNLKYLDLFGCVNLTSRDIANAT+SLENLEIRKPNFYIPRSVFHTERY HWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD

Query:  VFRI
        +FRI
Subjt:  VFRI

A0A6J1E082 F-box protein SKIP1-like3.5e-17799.34Show/hide
Query:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
        MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAAT SSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR
Subjt:  MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIR

Query:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
        IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP
Subjt:  IRHCSDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACP

Query:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
        QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSR+IANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD
Subjt:  QDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD

Query:  VFRI
        VFRI
Subjt:  VFRI

A0A6J1G461 F-box protein SKIP1-like5.1e-15286.2Show/hide
Query:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL
        A P+WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDLEPRFDS PTESPAWWSP+F+ KIDSMLRS + WS GSLSLIRIRHCSD 
Subjt:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL

Query:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA
        SL LV Q CPNLEVLSIKSC NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ  GIVP+ YLNACPQDVDSEA
Subjt:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
         AIAKFMPNLEHL+LCFSKL+AKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NAT++LENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

A0A6J1KKL1 F-box protein SKIP1-like1.1e-15186.2Show/hide
Query:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL
        A  +WAELT ECLTNI SRL++EQRWRGPMLVCKLW RAATDSSLFS FDL+PRFDS PTESPAWWSP+F+TKIDSMLRS + WS GSLSLIRIRHCSD 
Subjt:  ASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDL

Query:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA
        SL LV Q CPNLEVLSIKSC NVTD+SMAKIALGCQKL+EVDISYC+EIS+ SL+LIG+HCPNIKTLKRNFFNTLDPSQ  GIVP+ YLNACPQDVDSEA
Subjt:  SLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI
         AIAKFMPNLEHLELCFSK++AKAL+LIC+GCPNLKYLDLFGCVNLTSRDI NAT+SLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTD+FRI
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI

SwissProt top hitse value%identityAlignment
Q9FDX1 F-box protein SKIP11.0e-9658.45Show/hide
Query:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHL
        W  L  E L NI+SRL++++ W GPM V K W     D  L+S FDLEP FDS P ES   WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L  
Subjt:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHL

Query:  VPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIA
           RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G VP +YL+ACPQD D+EA AI 
Subjt:  VPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIA

Query:  KFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI
        K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV+L+SRDI +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  KFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI

Q9M096 Putative F-box/LRR-repeat protein 197.7e-8155.12Show/hide
Query:  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSL
        P W+ELT ECL +I SRLS EQRW GPMLV K W  A  D +L + FDLE RF S P ES  WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL
Subjt:  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSL

Query:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA
            +RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T + P DYL   P+  + EA  
Subjt:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA

Query:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR
        I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL GC++LT  DI   T+ L+NL EI KP+F  P +V    R G+ R
Subjt:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR

Q9M0U9 F-box protein SKIP195.2e-2130.77Show/hide
Query:  SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS
        S  W EL  E  + I+ RL   +       VC+ W R   D S++ + D+    D            +    ++ M R  +D S G L  I I +   + 
Subjt:  SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS

Query:  -LHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQ-DVDSE
         L+ +  R  NL  L +  C  +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK                    LN  PQ + D +
Subjt:  -LHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQ-DVDSE

Query:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
        A AIA+ MP L HL+LC + L+   L+ I + C NL++LDL  C N+
Subjt:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V8 Putative F-box/LRR-repeat protein 92.5e-2330.89Show/hide
Query:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LH
        WAEL  E  ++I+ RL   +  +    VCK W R   D S++ + D+  + +          S E    I+ +    +D S G L  I I +  + S L+
Subjt:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LH

Query:  LVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDV---DSEA
         +  R  NL  L +  C  V  + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N                     C  DV   D  A
Subjt:  LVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDV---DSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
         AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

Q9S9V9 Putative F-box/LRR-repeat protein 238.9e-2935.25Show/hide
Query:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRH--CSDLSL
        WAEL  +  ++I+ RL   +  +    VCK W R   D S++ + D++ R D A           F+  ++SM R  +D SHG L  I I +   +DL +
Subjt:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRH--CSDLSL

Query:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA
        + +  R  NL+ L +  C  +TD+ +AK       L  +++SYC   S ESL  IGR CPN+KTLK N              PE  +       D  A A
Subjt:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA

Query:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
        IA+ MP L HL+L  + LT K L+ I +GCP+L++LDL  C N+
Subjt:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

Arabidopsis top hitse value%identityAlignment
AT4G05460.1 RNI-like superfamily protein3.7e-2230.77Show/hide
Query:  SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS
        S  W EL  E  + I+ RL   +       VC+ W R   D S++ + D+    D            +    ++ M R  +D S G L  I I +   + 
Subjt:  SPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS

Query:  -LHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQ-DVDSE
         L+ +  R  NL  L +  C  +TD    + A+    L E+++SYC   S ESL ++G+ C N+KTLK                    LN  PQ + D +
Subjt:  -LHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQ-DVDSE

Query:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
        A AIA+ MP L HL+LC + L+   L+ I + C NL++LDL  C N+
Subjt:  AAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

AT4G05497.1 RNI-like superfamily protein1.8e-2430.89Show/hide
Query:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LH
        WAEL  E  ++I+ RL   +  +    VCK W R   D S++ + D+  + +          S E    I+ +    +D S G L  I I +  + S L+
Subjt:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLS-LH

Query:  LVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDV---DSEA
         +  R  NL  L +  C  V  + + + A+    L E+DI+Y   I  + L ++G+ CPN++TLK N                     C  DV   D  A
Subjt:  LVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDV---DSEA

Query:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
         AIA+ MP L HL+L  + L+   L+ I EGCP+LK L L  C+N+
Subjt:  AAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

AT4G30640.1 RNI-like superfamily protein5.5e-8255.12Show/hide
Query:  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSL
        P W+ELT ECL +I SRLS EQRW GPMLV K W  A  D +L + FDLE RF S P ES  WW+PEF+ K+DS LRSV+D S G L+ IRIRHC++ SL
Subjt:  PAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSL

Query:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA
            +RCPNLEVL IK+CPNVTD SM KIA+ C  LRE+DISY Y I+HESL  +GR C N+K LKRN    L PS  T + P DYL   P+  + EA  
Subjt:  HLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAA

Query:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR
        I K+M  L+HLE+ +S LTA+ L  +C+GC NL+Y+DL GC++LT  DI   T+ L+NL EI KP+F  P +V    R G+ R
Subjt:  IAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRSVFHTERYGHWR

AT5G52480.1 RNI-like superfamily protein3.9e-1935.84Show/hide
Query:  DSMLRSVLDWSHGSLSLIRIRHC-SDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN
        +++ R+ +D S G L  I I    SD  L  + +R  NL  L +  C  +TD    +  +    L E+++S    +S ES+ L G  CPN+KTL  N   
Subjt:  DSMLRSVLDWSHGSLSLIRIRHC-SDLSLHLVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFN

Query:  TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL
                      YL++   D D +A AIA+ MP L HL+LC +KLT   L+ I +GCP+L++LDL  C+NL
Subjt:  TLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNL

AT5G57900.1 SKP1 interacting partner 17.1e-9858.45Show/hide
Query:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHL
        W  L  E L NI+SRL++++ W GPM V K W     D  L+S FDLEP FDS P ES   WSPEF+ K+D MLRSV+DWS G L+ IR+RHCSD +L  
Subjt:  WAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLHL

Query:  VPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIA
           RCPNL+VL+I+S PNVTD SM KIA  C+ L+E+DISYC+EISH++L +IGR+CPN++ LKRN  +    S+H G VP +YL+ACPQD D+EA AI 
Subjt:  VPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIA

Query:  KFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI
        K M NLEHLE+ FS+L+ K L+ ICEGCP L+YLDLFGCV+L+SRDI +  + L+ L E++KP+ Y+PRS  V  TERYGHWRLYDERF     RI
Subjt:  KFMPNLEHLELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENL-EIRKPNFYIPRS--VFHTERYGHWRLYDERFQTDVFRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGATCCGTCGGAATCGGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCAT
GCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGT
CGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCAT
CTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATCGCTCTTGGTTGCCAAAAGCTCCGGGA
AGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATC
CTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTT
GAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCGA
TATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATG
ACGAGAGGTTCCAAACGGATGTTTTCCGAATT
mRNA sequenceShow/hide mRNA sequence
ATGACAGATCCGTCGGAATCGGCGTCGCCGGCGTGGGCCGAGCTGACGCACGAGTGCCTGACCAACATCGTGTCGCGGCTGAGCGTGGAGCAGCGGTGGCGCGGCCCCAT
GCTCGTCTGCAAGCTCTGGTTCCGCGCCGCCACCGACTCCTCTCTCTTCTCCGAGTTCGACCTCGAACCCCGATTCGACTCGGCGCCCACCGAGTCACCGGCCTGGTGGT
CGCCCGAGTTCCAGACCAAAATCGATTCCATGCTCCGATCGGTCCTCGATTGGAGCCATGGATCTCTCTCCCTTATTCGGATCAGACACTGCTCCGATCTCTCCCTTCAT
CTCGTCCCTCAAAGGTGCCCAAACCTTGAGGTTCTTTCCATCAAGAGCTGCCCCAATGTTACAGATAAATCAATGGCTAAGATCGCTCTTGGTTGCCAAAAGCTCCGGGA
AGTCGACATCAGCTACTGTTATGAAATCTCCCACGAATCTTTGGCGTTAATCGGCAGGCATTGTCCAAATATAAAGACTCTAAAACGGAACTTTTTCAACACTCTAGATC
CTTCCCAACACACGGGAATTGTCCCCGAAGATTATCTAAATGCCTGCCCTCAAGATGTGGATTCAGAAGCTGCAGCTATTGCAAAGTTCATGCCCAACTTGGAGCACCTT
GAACTCTGTTTCTCTAAACTAACAGCTAAAGCCCTTAGTTTGATCTGTGAAGGATGTCCAAACCTCAAGTACTTGGATCTGTTTGGGTGTGTGAACTTGACAAGCCGCGA
TATAGCGAATGCTACTACAAGTCTGGAGAATTTGGAGATTAGGAAACCAAATTTCTATATACCGAGGTCGGTCTTTCACACAGAGAGGTATGGTCATTGGAGGCTGTATG
ACGAGAGGTTCCAAACGGATGTTTTCCGAATT
Protein sequenceShow/hide protein sequence
MTDPSESASPAWAELTHECLTNIVSRLSVEQRWRGPMLVCKLWFRAATDSSLFSEFDLEPRFDSAPTESPAWWSPEFQTKIDSMLRSVLDWSHGSLSLIRIRHCSDLSLH
LVPQRCPNLEVLSIKSCPNVTDKSMAKIALGCQKLREVDISYCYEISHESLALIGRHCPNIKTLKRNFFNTLDPSQHTGIVPEDYLNACPQDVDSEAAAIAKFMPNLEHL
ELCFSKLTAKALSLICEGCPNLKYLDLFGCVNLTSRDIANATTSLENLEIRKPNFYIPRSVFHTERYGHWRLYDERFQTDVFRI