; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007217 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007217
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description26S proteasome non-ATPase regulatory subunit 9
Genome locationscaffold25:1517656..1522030
RNA-Seq ExpressionMS007217
SyntenyMS007217
Gene Ontology termsGO:0070682 - proteasome regulatory particle assembly (biological process)
GO:0000502 - proteasome complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR035269 - 26S Proteasome non-ATPase regulatory subunit 9
IPR036034 - PDZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056101.1 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo var. makuwa]3.0e-8780.53Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA SLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        RDAGNTEGS  QRSSVT  T+P+SN   Q +SS++MDIDAN SIPFALVDE+ADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLGYV
        VMRHGTP+NL +TPRSWQGRGLLGYV
Subjt:  VMRHGTPLNLILTPRSWQGRGLLGYV

XP_004144734.1 26S proteasome non-ATPase regulatory subunit 9 [Cucumis sativus]6.2e-8579.46Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA  LSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        R+AGNTEGS  QRSS+T  T+P+SN   Q +SS++MDIDAN SIPFALVDEIADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        VMRHGTP+NL +TPRSWQGRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

XP_008452876.1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 9 [Cucumis melo]5.6e-8680.36Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA SLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        RDAGNTEGS  QRSSVT  T+P+SN   Q +SS++MDIDAN SIPFALVDE+ADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        VMRHGTP+NL +TPRSWQGRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

XP_022158159.1 26S proteasome non-ATPase regulatory subunit 9 [Momordica charantia]1.3e-11193.28Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF----------------LRNDHTEITEKINQN
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF                LRNDHTEITEKINQN
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF----------------LRNDHTEITEKINQN

Query:  IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA
        IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA
Subjt:  IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA

Query:  SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG
        SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG
Subjt:  SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG

XP_023545321.1 26S proteasome non-ATPase regulatory subunit 9-like [Cucurbita pepo subsp. pepo]5.3e-8479.91Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPASSLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVTTA--PASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        +DAGNTE SN QRSSVTT   P+SN      SS++MDIDAN  IPFALVDEIADASPAADDGLQLGDQVLKFGNVE GDDLLHRLASEAQ+NQGRPIPVV
Subjt:  RDAGNTEGSNDQRSSVTTA--PASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        V RHGTP+NL +TPRSW GRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

TrEMBL top hitse value%identityAlignment
A0A0A0LGM6 Nas2_N domain-containing protein3.0e-8579.46Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA  LSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        R+AGNTEGS  QRSS+T  T+P+SN   Q +SS++MDIDAN SIPFALVDEIADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        VMRHGTP+NL +TPRSWQGRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

A0A1S3BUX8 26S proteasome non-ATPase regulatory subunit 92.7e-8680.36Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA SLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        RDAGNTEGS  QRSSVT  T+P+SN   Q +SS++MDIDAN SIPFALVDE+ADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        VMRHGTP+NL +TPRSWQGRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

A0A5A7URF2 26S proteasome non-ATPase regulatory subunit 91.4e-8780.53Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPA SLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        RDAGNTEGS  QRSSVT  T+P+SN   Q +SS++MDIDAN SIPFALVDE+ADASPAADDGLQLGDQVLKFGNVE GDDLL RLASEAQ NQGR IPVV
Subjt:  RDAGNTEGSNDQRSSVT--TAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLGYV
        VMRHGTP+NL +TPRSWQGRGLLGYV
Subjt:  VMRHGTPLNLILTPRSWQGRGLLGYV

A0A6J1DYK6 26S proteasome non-ATPase regulatory subunit 96.5e-11293.28Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF----------------LRNDHTEITEKINQN
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF                LRNDHTEITEKINQN
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLF----------------LRNDHTEITEKINQN

Query:  IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA
        IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA
Subjt:  IQVLHSAKPASSLSLSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLA

Query:  SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG
        SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG
Subjt:  SEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG

A0A6J1KBP8 26S proteasome non-ATPase regulatory subunit 9-like isoform X12.2e-8379.46Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQP GPGLSGNLVDSE        + +  S+       LRNDHTEITEKINQNIQVLHSAKPASSLSLS
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVTTA--PASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV
        +DAGNTE SN QRSSVTT   P+SN      SS++MDIDAN  IPFALVDEIADASPAADDGLQLGDQVLKFGNVE GDDLLHRLASEAQ+NQGRPIPVV
Subjt:  RDAGNTEGSNDQRSSVTTA--PASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVV

Query:  VMRHGTPLNLILTPRSWQGRGLLG
        V RHGTP+NL +TPRSW GRGLLG
Subjt:  VMRHGTPLNLILTPRSWQGRGLLG

SwissProt top hitse value%identityAlignment
O00233 26S proteasome non-ATPase regulatory subunit 96.6e-1327.11Show/hide
Query:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHS---------AKPASSLS
        S+  +LM+++  IEAQ+ A    L    G G++  LVD E        L    +   +  + L+NDH  + +++ + +  LH+            A   +
Subjt:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHS---------AKPASSLS

Query:  LSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPV
        +SR  G +E     R+                             FA V+ I+  SPA+  GLQ+ D++++FG+V   +   LH + S  Q ++G+P+ V
Subjt:  LSRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPV

Query:  VVMRHGTPLNLILTPRSWQGRGLLG
         V+R G    L L P  W G+GLLG
Subjt:  VVMRHGTPLNLILTPRSWQGRGLLG

Q3SZ19 26S proteasome non-ATPase regulatory subunit 95.1e-1328.57Show/hide
Query:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLSRDAGNT
        S+  +L++++  IEAQ+ A    L    G G++  LVD E     D  L  + +++ +   + L+NDH  + +++   +  LH+           +A   
Subjt:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLSRDAGNT

Query:  EGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRHGTP
          S DQ   ++ A A                      FA V+ I+  SPA+  GLQ+ D++L+FG+V   +   L  + S  Q ++G+P+ V VMR G  
Subjt:  EGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRHGTP

Query:  LNLILTPRSWQGRGLLG
          L L P  W G+GLLG
Subjt:  LNLILTPRSWQGRGLLG

Q9CR00 26S proteasome non-ATPase regulatory subunit 92.8e-1128.18Show/hide
Query:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHS---AKPASSLSLSRDA
        S+  DLM+++  IEA++ A    L    G G++  LVD E     D  L  + +++ +   + L+NDH  + +++ + +  LH+    K A  ++ +R+ 
Subjt:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHS---AKPASSLSLSRDA

Query:  GNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRH
                         A N  L SNS             FA V+ I+  SPA+  GLQ+ D++++FG+V   +   +  + +  Q ++G+P+ V V+R 
Subjt:  GNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRH

Query:  GTPLNLILTPRSWQGRGLLG
        G    L L P  W G+GLLG
Subjt:  GTPLNLILTPRSWQGRGLLG

Q9VFS8 26S proteasome non-ATPase regulatory subunit 91.9e-0725.74Show/hide
Query:  MVASNLKSETMD-LMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSL
        M A     E ++ L+  +  +EAQ++     L      G+SG LVD+E    +  + +     +    + L+NDH E+  +I   +   HS         
Subjt:  MVASNLKSETMD-LMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSL

Query:  SRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADA------------SPAADDGLQLGDQVLKFGNVEAGD--DLLHRLAS
                         TT P        N +S++D+D++ S   A + ++A A            SPA   GL  GD +L+FG++ +G+    L ++  
Subjt:  SRDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADA------------SPAADDGLQLGDQVLKFGNVEAGD--DLLHRLAS

Query:  EAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG
          +  Q + + + V R    L+LIL P++W GRGLLG
Subjt:  EAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGLLG

Q9WTV5 26S proteasome non-ATPase regulatory subunit 99.5e-1227.65Show/hide
Query:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLSRDAGNT
        S+  +LM+++  IEAQ+ A    L    G G++  LVD E     D  L  + +++ +   + L+NDH  + +++ + +  LH+         +RD    
Subjt:  SETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSE-VIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLSRDAGNT

Query:  EGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRHGTP
              R   + +PA                      FA V+ I+  SPA+  GLQ+ D++++FG+V   +   L  + +  Q ++G+P+ V+V+R G  
Subjt:  EGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGD-DLLHRLASEAQTNQGRPIPVVVMRHGTP

Query:  LNLILTPRSWQGRGLLG
          L LTP  W G+GLLG
Subjt:  LNLILTPRSWQGRGLLG

Arabidopsis top hitse value%identityAlignment
AT5G57950.1 26S proteasome regulatory subunit, putative1.4e-5553.15Show/hide
Query:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS
        MV +NLK+ETM LM KR+A+E +M++I+ RLC PGGPGLSGNL+DSE    +   + +  ++       LR++H EITEKIN NIQ+LHS +P S  S +
Subjt:  MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLS

Query:  RDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVVVM
        +D+G  E S    +  + + +  +   S +S  MD+D   SIPFA+VDEI ++SPAA+ GLQLGDQVLKFGNVE GD+LL RLA+EAQ+NQG+ + V VM
Subjt:  RDAGNTEGSNDQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVVVM

Query:  RHGTPLNLILTPRSWQGRGLLG
        R G  + L +TPR WQGRGLLG
Subjt:  RHGTPLNLILTPRSWQGRGLLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGCTTCTAATCTAAAATCGGAGACAATGGATCTGATGCAGAAGAGGAGCGCTATCGAGGCGCAGATGGATGCCATCATTTCGCGTCTTTGTCAGCCTGGCGGTCC
TGGACTCTCTGGGAATCTCGTCGACTCTGAGGTGATTGCAATGGATTCTTTCCTCCTACTTATCTTTTCATCTCAAAGTTCTTCTTGGTTTTTGTTCCTGAGGAATGACC
ACACGGAGATCACAGAAAAGATTAATCAGAACATACAAGTTTTGCATTCTGCTAAGCCTGCTTCCAGTTTGTCACTTTCTAGGGATGCAGGGAATACAGAGGGTTCAAAC
GACCAAAGGTCATCTGTCACAACTGCTCCAGCCTCGAATAGTTTTTTACAGAGCAACTCTTCGAGTAGCATGGATATAGATGCAAATTGCAGCATACCGTTTGCACTGGT
AGATGAAATAGCCGATGCATCTCCAGCAGCAGATGATGGATTACAACTCGGCGATCAAGTTCTTAAATTTGGGAATGTAGAGGCCGGTGATGATCTGTTGCATAGGCTTG
CCTCTGAAGCACAGACTAATCAAGGCCGTCCAATACCTGTTGTAGTTATGAGGCATGGTACTCCCCTAAATTTGATTCTCACCCCCAGATCATGGCAAGGCCGGGGTCTC
CTCGGGTATGTT
mRNA sequenceShow/hide mRNA sequence
ATGGTGGCTTCTAATCTAAAATCGGAGACAATGGATCTGATGCAGAAGAGGAGCGCTATCGAGGCGCAGATGGATGCCATCATTTCGCGTCTTTGTCAGCCTGGCGGTCC
TGGACTCTCTGGGAATCTCGTCGACTCTGAGGTGATTGCAATGGATTCTTTCCTCCTACTTATCTTTTCATCTCAAAGTTCTTCTTGGTTTTTGTTCCTGAGGAATGACC
ACACGGAGATCACAGAAAAGATTAATCAGAACATACAAGTTTTGCATTCTGCTAAGCCTGCTTCCAGTTTGTCACTTTCTAGGGATGCAGGGAATACAGAGGGTTCAAAC
GACCAAAGGTCATCTGTCACAACTGCTCCAGCCTCGAATAGTTTTTTACAGAGCAACTCTTCGAGTAGCATGGATATAGATGCAAATTGCAGCATACCGTTTGCACTGGT
AGATGAAATAGCCGATGCATCTCCAGCAGCAGATGATGGATTACAACTCGGCGATCAAGTTCTTAAATTTGGGAATGTAGAGGCCGGTGATGATCTGTTGCATAGGCTTG
CCTCTGAAGCACAGACTAATCAAGGCCGTCCAATACCTGTTGTAGTTATGAGGCATGGTACTCCCCTAAATTTGATTCTCACCCCCAGATCATGGCAAGGCCGGGGTCTC
CTCGGGTATGTT
Protein sequenceShow/hide protein sequence
MVASNLKSETMDLMQKRSAIEAQMDAIISRLCQPGGPGLSGNLVDSEVIAMDSFLLLIFSSQSSSWFLFLRNDHTEITEKINQNIQVLHSAKPASSLSLSRDAGNTEGSN
DQRSSVTTAPASNSFLQSNSSSSMDIDANCSIPFALVDEIADASPAADDGLQLGDQVLKFGNVEAGDDLLHRLASEAQTNQGRPIPVVVMRHGTPLNLILTPRSWQGRGL
LGYV