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MS007221 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007221
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold25:1551313..1551621
RNA-Seq ExpressionMS007221
SyntenyMS007221
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056096.1 hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa]1.8e-1051.4Show/hide
Query:  GRRWQHHQYQKL-FNGGNGGRSVV-RRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHW
        GRRW+ H Y+KL  +GG+  R VV    R RW+K   K        G++GFRL    RL+    LK+ F+M L RRI EIV  +K VEDVCPN IFST W
Subjt:  GRRWQHHQYQKL-FNGGNGGRSVV-RRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHW

Query:  GLPVLNY
        GLPVL+Y
Subjt:  GLPVLNY

KAG6599155.1 Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0846.53Show/hide
Query:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLRLK----LKLCFIMLLWRRIAEIVEGIKVEDVCPNFIFSTHWGLPVLNY
        GRRW  +QY+KL    N     V + R RWMK   K    R + G R +RL       LK+ F++L+ RRI EIV  +KVEDVC N IF T WGLP L+Y
Subjt:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLRLK----LKLCFIMLLWRRIAEIVEGIKVEDVCPNFIFSTHWGLPVLNY

Query:  S
        +
Subjt:  S

KGN61039.1 hypothetical protein Csa_021124 [Cucumis sativus]4.2e-1254.29Show/hide
Query:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHWGL
        GRRW+ H Y+KL N G   R VV R R RW+K   K        G++GFRL    RLK    LK+ F+M L RRI EIV  +K VEDVCPN IFST WGL
Subjt:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHWGL

Query:  PVLNY
        PVL+Y
Subjt:  PVLNY

OWM72354.1 hypothetical protein CDL15_Pgr018239 [Punica granatum]1.7e-0544Show/hide
Query:  RWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLR-LKLKLCFIMLLWRRIAEIVEGI----KVEDVCPNFIFSTHWGLPVLNYS
        R +H QYQKL    + G  V  R RGRW+K         R  GIR  R R L L+   + L   RIA I  GI     V+ +CP  +FSTHWGLPVL++S
Subjt:  RWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLR-LKLKLCFIMLLWRRIAEIVEGI----KVEDVCPNFIFSTHWGLPVLNYS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ29 Uncharacterized protein2.0e-1254.29Show/hide
Query:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHWGL
        GRRW+ H Y+KL N G   R VV R R RW+K   K        G++GFRL    RLK    LK+ F+M L RRI EIV  +K VEDVCPN IFST WGL
Subjt:  GRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHWGL

Query:  PVLNY
        PVL+Y
Subjt:  PVLNY

A0A218WHP1 Uncharacterized protein8.3e-0644Show/hide
Query:  RWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLR-LKLKLCFIMLLWRRIAEIVEGI----KVEDVCPNFIFSTHWGLPVLNYS
        R +H QYQKL    + G  V  R RGRW+K         R  GIR  R R L L+   + L   RIA I  GI     V+ +CP  +FSTHWGLPVL++S
Subjt:  RWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLR-LKLKLCFIMLLWRRIAEIVEGI----KVEDVCPNFIFSTHWGLPVLNYS

A0A5D3BCS3 Uncharacterized protein8.6e-1151.4Show/hide
Query:  GRRWQHHQYQKL-FNGGNGGRSVV-RRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHW
        GRRW+ H Y+KL  +GG+  R VV    R RW+K   K        G++GFRL    RL+    LK+ F+M L RRI EIV  +K VEDVCPN IFST W
Subjt:  GRRWQHHQYQKL-FNGGNGGRSVV-RRSRGRWMKSKKKTMIFRRRIGIRGFRL----RLK----LKLCFIMLLWRRIAEIVEGIK-VEDVCPNFIFSTHW

Query:  GLPVLNY
        GLPVL+Y
Subjt:  GLPVLNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCTTCCATGGTGGAGCTGGGGCGTCGATGGCAGCACCACCAGTACCAGAAGCTATTCAATGGCGGCAATGGTGGCAGATCAGTGGTAAGGCGCAGCCGAGGGCGGTGGAT
GAAGTCGAAGAAGAAGACGATGATATTCAGGAGACGAATTGGAATCCGAGGTTTTCGATTGCGATTGAAATTGAAGCTGTGTTTTATAATGTTGCTGTGGAGGAGAATTG
CAGAGATTGTGGAAGGAATTAAGGTGGAAGATGTGTGCCCTAATTTCATCTTCTCCACTCATTGGGGTCTACCTGTTTTAAATTATTCC
mRNA sequenceShow/hide mRNA sequence
TCTTCCATGGTGGAGCTGGGGCGTCGATGGCAGCACCACCAGTACCAGAAGCTATTCAATGGCGGCAATGGTGGCAGATCAGTGGTAAGGCGCAGCCGAGGGCGGTGGAT
GAAGTCGAAGAAGAAGACGATGATATTCAGGAGACGAATTGGAATCCGAGGTTTTCGATTGCGATTGAAATTGAAGCTGTGTTTTATAATGTTGCTGTGGAGGAGAATTG
CAGAGATTGTGGAAGGAATTAAGGTGGAAGATGTGTGCCCTAATTTCATCTTCTCCACTCATTGGGGTCTACCTGTTTTAAATTATTCC
Protein sequenceShow/hide protein sequence
SSMVELGRRWQHHQYQKLFNGGNGGRSVVRRSRGRWMKSKKKTMIFRRRIGIRGFRLRLKLKLCFIMLLWRRIAEIVEGIKVEDVCPNFIFSTHWGLPVLNYS