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MS007222 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007222
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionLoricrin
Genome locationscaffold25:1553262..1553762
RNA-Seq ExpressionMS007222
SyntenyMS007222
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030094.1 hypothetical protein SDJN02_08441, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-4670.91Show/hide
Query:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL
        MLESG+AEN +SDVGCSGVNDD DDEDDE  K+MA AQI      D GK    ++GFGKAK+V+ YPFRKAKKQILRR+IKR     +SSSS   T RT 
Subjt:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL

Query:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLG
        SSDKRV DGSVNQGCGFCF +L ISDSKNG   TDPN+RKF++EMLK+LIEKNDFYSKE NPHLG
Subjt:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLG

XP_008452984.1 PREDICTED: uncharacterized protein LOC103493824 [Cucumis melo]1.0e-4769.41Show/hide
Query:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTA----------
        MLES HAE N+SDVGCSGVNDD DDEDDET  TMA  QI  D  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IKR SS S ++          
Subjt:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTA----------

Query:  -TSRTLSSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
         + RT S DKR  DGSVNQGCGFC  +L ISDSKNGS  TDPN+RKFT+EMLK+LIEKNDFYSKE NPHL
Subjt:  -TSRTLSSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

XP_011648888.1 uncharacterized protein LOC101216013 [Cucumis sativus]4.1e-4973.01Show/hide
Query:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL
        MLES HAE N+SDVGCSGVNDD DDEDDET  TMA  QI  D  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IKR     +SSSS T + RT 
Subjt:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL

Query:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH
        S DKR  DGSVNQGCGFC  +L ISDSKNGS  TDPN+RKFT+EMLK+LIEKNDFYSKE NPH
Subjt:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH

XP_022156407.1 uncharacterized protein LOC111023307 [Momordica charantia]6.9e-81100Show/hide
Query:  MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV
        MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV
Subjt:  MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV

Query:  VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
        VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
Subjt:  VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

XP_038890967.1 uncharacterized protein LOC120080390 [Benincasa hispida]1.8e-5276.07Show/hide
Query:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRA----SSSSFTATSRTLS
        MLES HAE N+SDVGCSG NDD DDEDDET KTMA  QI HD  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IK A    SSSS T T +T S
Subjt:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRA----SSSSFTATSRTLS

Query:  SDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
        SDKR  DGSVNQGCGFCF +L ISDSKNGS  TDPNNRKFT+EMLK+LIEKNDFYSKE NPHL
Subjt:  SDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

TrEMBL top hitse value%identityAlignment
A0A0A0LH19 Uncharacterized protein2.0e-4973.01Show/hide
Query:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL
        MLES HAE N+SDVGCSGVNDD DDEDDET  TMA  QI  D  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IKR     +SSSS T + RT 
Subjt:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL

Query:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH
        S DKR  DGSVNQGCGFC  +L ISDSKNGS  TDPN+RKFT+EMLK+LIEKNDFYSKE NPH
Subjt:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH

A0A1S3BWA1 uncharacterized protein LOC1034938244.9e-4869.41Show/hide
Query:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTA----------
        MLES HAE N+SDVGCSGVNDD DDEDDET  TMA  QI  D  DDD K   GK+GFGKAKQV+ YPFRKAKKQILRR+IKR SS S ++          
Subjt:  MLESGHAE-NVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTA----------

Query:  -TSRTLSSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
         + RT S DKR  DGSVNQGCGFC  +L ISDSKNGS  TDPN+RKFT+EMLK+LIEKNDFYSKE NPHL
Subjt:  -TSRTLSSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

A0A6J1DRZ8 uncharacterized protein LOC1110233073.4e-81100Show/hide
Query:  MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV
        MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV
Subjt:  MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRV

Query:  VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
        VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
Subjt:  VDGSVNQGCGFCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

A0A6J1G2R9 uncharacterized protein LOC1114502625.6e-4468.9Show/hide
Query:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL
        MLESG+AEN +SDVGCSGVNDD DDEDDE  K+MA AQI      D GK    ++GFGKAK+V+ YPFRKAKKQILRR+IKR     +SSSS     RT 
Subjt:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL

Query:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
        SSDK V DGSVNQGCGFCF +L ISD KNG   TDPN+RKFT++MLK+LIEKNDFYSKE NPHL
Subjt:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

A0A6J1KI22 uncharacterized protein LOC1114940225.1e-4570.12Show/hide
Query:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL
        MLESG+AEN +SDVGCSGVNDD DDED+E  K+MA  QI      D GK    ++GFGKAK+V+ YPFRKAKKQILRR+IKR     +SSSS   T RT 
Subjt:  MLESGHAEN-VSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKR-----ASSSSFTATSRTL

Query:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL
        SSDKRV DGSVNQGCGFCF +L ISDSKNG   TDPN+RKFT+EMLK+LIEKNDFYSKE NPHL
Subjt:  SSDKRVVDGSVNQGCGFCFKEL-ISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G26720.1 unknown protein2.7e-0652.63Show/hide
Query:  DSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH
        DS   S  +DPN+ +F+ EML++++E NDF S ECNPH
Subjt:  DSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAATCAGGACATGCTGAGAATGTCTCAGATGTTGGTTGCAGTGGTGTTAATGACGACGAAGATGATGAGGACGACGAGACTGGTAAAACTATGGCGGCGGCCCA
AATCGGGCATGATTGTGATGATGATGATGGAAAAAAGCACAAGGGTAAAAGGGGTTTTGGAAAGGCGAAGCAGGTGATTTCATATCCATTTCGAAAGGCGAAGAAACAAA
TTCTTCGGCGGAAAATTAAGAGAGCTTCTTCTTCTTCTTTTACTGCTACTAGTAGAACACTTTCTTCGGATAAGAGGGTTGTTGATGGAAGTGTAAATCAAGGCTGTGGT
TTCTGTTTCAAAGAACTAATTTCAGATTCTAAGAATGGGTCTCAAACGACAGACCCAAATAACCGGAAGTTCACTGATGAAATGTTGAAACTGCTCATTGAGAAGAATGA
TTTCTACTCCAAAGAGTGCAATCCTCATTTAGGTACTTGTCTATCCTCATTTAACGGAATT
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAATCAGGACATGCTGAGAATGTCTCAGATGTTGGTTGCAGTGGTGTTAATGACGACGAAGATGATGAGGACGACGAGACTGGTAAAACTATGGCGGCGGCCCA
AATCGGGCATGATTGTGATGATGATGATGGAAAAAAGCACAAGGGTAAAAGGGGTTTTGGAAAGGCGAAGCAGGTGATTTCATATCCATTTCGAAAGGCGAAGAAACAAA
TTCTTCGGCGGAAAATTAAGAGAGCTTCTTCTTCTTCTTTTACTGCTACTAGTAGAACACTTTCTTCGGATAAGAGGGTTGTTGATGGAAGTGTAAATCAAGGCTGTGGT
TTCTGTTTCAAAGAACTAATTTCAGATTCTAAGAATGGGTCTCAAACGACAGACCCAAATAACCGGAAGTTCACTGATGAAATGTTGAAACTGCTCATTGAGAAGAATGA
TTTCTACTCCAAAGAGTGCAATCCTCATTTAGGTACTTGTCTATCCTCATTTAACGGAATT
Protein sequenceShow/hide protein sequence
MLESGHAENVSDVGCSGVNDDEDDEDDETGKTMAAAQIGHDCDDDDGKKHKGKRGFGKAKQVISYPFRKAKKQILRRKIKRASSSSFTATSRTLSSDKRVVDGSVNQGCG
FCFKELISDSKNGSQTTDPNNRKFTDEMLKLLIEKNDFYSKECNPHLGTCLSSFNGI