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MS007229 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007229
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Genome locationscaffold25:1614331..1614609
RNA-Seq ExpressionMS007229
SyntenyMS007229
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035003.1 hypothetical protein E6C27_scaffold57G00440 [Cucumis melo var. makuwa]5.0e-1252.63Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT
        NN+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E +T T
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT

KAA0056089.1 hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa]8.5e-2064.71Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE
        +S+NNK+QK  KS+  SC FS FG+FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I +QIR SE +
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE

KAG6586063.1 hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1963.53Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE
        AS+NNK+QKP+   S SC FS F +F++RDSR+RR  D+ ++D RKVWPSD D+ ++WVAEPGIDRKAKAYID+I+ QIR S TE
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIY-QIRFSETE

KAG6592315.1 hypothetical protein SDJN03_14661, partial [Cucurbita argyrosperma subsp. sororia]6.5e-1252.94Show/hide
Query:  KSSSASCLFSWFGVFKARDSRRRRDGD-----DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHTEP
        +S  A   FS F  FK R  R+    D     D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E +T T P
Subjt:  KSSSASCLFSWFGVFKARDSRRRRDGD-----DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHTEP

KAG6599163.1 hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1967.44Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDD-AMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE
        ASSN++++KP+   S SC FS   +FK+R  R+R D D  AMEDTRKVWPSD DKG+HWVAEPGIDRKAKAYIDRI YQIR+S  E
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDD-AMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE

TrEMBL top hitse value%identityAlignment
A0A0A0KAK6 Uncharacterized protein3.2e-1252.63Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT
        NN+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E +T T
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT

A0A0A0LJ24 Uncharacterized protein4.1e-2063.53Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE
        +S+NNK+QK +KS+  SC FS F +FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I +QIR S+T+
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE

A0A5A7SWT9 Uncharacterized protein2.4e-1252.63Show/hide
Query:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT
        NN+Q+K   S      FS F  FK   SRR R GD         D M  + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E +T T
Subjt:  NNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGD---------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHT

A0A5A7SYN4 Uncharacterized protein7.0e-1250.55Show/hide
Query:  KPRKSSSASCLFSWFGVFKARDSRRRRDGD------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHTEPLN
        K +KS S+   FS+F  FK++ S++    D      D    + KVWPSD DK  HWVAEPGIDRKAK YIDRIY+ R  E+E +T T P N
Subjt:  KPRKSSSASCLFSWFGVFKARDSRRRRDGD------DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHTEPLN

A0A5D3BDY2 Uncharacterized protein4.1e-2064.71Show/hide
Query:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE
        +S+NNK+QK  KS+  SC FS FG+FK+RD  +R D    M+DTRKVWPSD DKG+HWVAEPGIDRKAKAYI++I +QIR SE +
Subjt:  ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRI-YQIRFSETE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.4e-0948.1Show/hide
Query:  RKSSSASCLFSWFGVFKARDSRR-RRDGD-DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKT
        +  S +S  FS F  FK R S R   DG  D    TRK   SD DK ++WVAEPGIDRKA A+I + +  R SE+E +T
Subjt:  RKSSSASCLFSWFGVFKARDSRR-RRDGD-DAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKT

AT5G26620.1 unknown protein3.2e-0950Show/hide
Query:  RDSRRRRDGDDAMED---TRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKT
        R S  R + D + +D   TRK W SD DK ++WVAEPGIDRKA A+I + +  R SE+E +T
Subjt:  RDSRRRRDGDDAMED---TRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GCATCCAGCAACAACAAGCAGCAGAAGCCAAGGAAGTCATCGTCGGCCTCGTGTCTCTTTTCGTGGTTCGGCGTGTTCAAGGCTCGAGACAGTAGGAGGAGGCGGGACGG
GGACGATGCGATGGAAGACACACGAAAAGTGTGGCCGAGCGACAGCGACAAGGGCAAGCACTGGGTGGCTGAGCCTGGCATCGATAGGAAAGCGAAGGCTTACATCGATA
GGATCTACCAAATCCGCTTCTCCGAAACCGAGTGTAAAACTCACACCGAGCCATTGAAT
mRNA sequenceShow/hide mRNA sequence
GCATCCAGCAACAACAAGCAGCAGAAGCCAAGGAAGTCATCGTCGGCCTCGTGTCTCTTTTCGTGGTTCGGCGTGTTCAAGGCTCGAGACAGTAGGAGGAGGCGGGACGG
GGACGATGCGATGGAAGACACACGAAAAGTGTGGCCGAGCGACAGCGACAAGGGCAAGCACTGGGTGGCTGAGCCTGGCATCGATAGGAAAGCGAAGGCTTACATCGATA
GGATCTACCAAATCCGCTTCTCCGAAACCGAGTGTAAAACTCACACCGAGCCATTGAAT
Protein sequenceShow/hide protein sequence
ASSNNKQQKPRKSSSASCLFSWFGVFKARDSRRRRDGDDAMEDTRKVWPSDSDKGKHWVAEPGIDRKAKAYIDRIYQIRFSETECKTHTEPLN