; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007230 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007230
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Description40S ribosomal protein S23-1
Genome locationscaffold25:1618991..1620263
RNA-Seq ExpressionMS007230
SyntenyMS007230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156333.1 uncharacterized protein LOC111023254 [Momordica charantia]6.4e-50100Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022937466.1 uncharacterized protein LOC111443868 [Cucurbita moschata]2.4e-4489.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_022969628.1 uncharacterized protein LOC111468599 [Cucurbita maxima]8.1e-4590.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_023538321.1 uncharacterized protein LOC111799138 [Cucurbita pepo subsp. pepo]1.8e-4489.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDG++MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

XP_038889141.1 uncharacterized protein LOC120079031 [Benincasa hispida]5.1e-4794.95Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR LGFSDGEVMRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDKRKVV+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

TrEMBL top hitse value%identityAlignment
A0A1S3BWM4 uncharacterized protein LOC1034939371.8e-4286.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A5D3BBN9 40S ribosomal protein S23-11.8e-4286.6Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV
        MALRR+LGFSDGE+MRSDA PC QLMKQTAGLC+V G L FW+LCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYD+ K+
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKV

A0A6J1DQC3 uncharacterized protein LOC1110232543.1e-50100Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1FAF1 uncharacterized protein LOC1114438681.1e-4489.9Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK +  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

A0A6J1I1J3 uncharacterized protein LOC1114685993.9e-4590.91Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR
        MALRR  GFSDGE+MRSDA PC QLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGA SMSATSALLVRLFSPECEPQNIAAYDK K  R
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G57540.1 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.2 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK

AT1G57540.3 unknown protein1.9e-3975Show/hide
Query:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK
        MALR+ LG+S+G++MRSDA PC +LMKQTA + TVGG L FW+LCRLHYGPRITVPRSLRWA CGA+S+S ++A+LVRLFSPECEPQNIAAYD  K
Subjt:  MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTGGGAGG
AGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGTGCAACCTCGG
CTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTTAGACGTATCTTAGGATTTTCAGATGGTGAGGTAATGAGGTCAGATGCTACACCCTGTCCACAGTTGATGAAACAGACTGCTGGGTTATGTACTGTGGGAGG
AGGACTTGCGTTCTGGATTCTCTGTAGATTACATTATGGTCCAAGAATCACAGTACCTAGGAGTCTCCGTTGGGCAGCTTGTGGAGCAGTATCGATGAGTGCAACCTCGG
CTTTGCTTGTTCGGTTATTCAGTCCAGAGTGTGAACCCCAGAATATAGCTGCTTATGATAAACGGAAAGTTGTAAGG
Protein sequenceShow/hide protein sequence
MALRRILGFSDGEVMRSDATPCPQLMKQTAGLCTVGGGLAFWILCRLHYGPRITVPRSLRWAACGAVSMSATSALLVRLFSPECEPQNIAAYDKRKVVR