; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007250 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007250
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRNA polymerase II-associated protein 3
Genome locationscaffold25:1744720..1751418
RNA-Seq ExpressionMS007250
SyntenyMS007250
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001440 - Tetratricopeptide repeat 1
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat
IPR025986 - RNA-polymerase II-associated protein 3-like, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022156426.1 RNA polymerase II-associated protein 3 [Momordica charantia]8.2e-24999.35Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDSSLDFQGFLNDMQDWELSLK KDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKE+GNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQ+TEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

XP_022937809.1 RNA polymerase II-associated protein 3 isoform X1 [Cucurbita moschata]2.0e-21086.06Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELSL  +DKKLKP A  KEKEG R+  KA+AADY+KHYDAVN LS    TEQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARLLKAISPAKLPQIFKNAL+AP+LID VKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

XP_022965718.1 RNA polymerase II-associated protein 3 isoform X1 [Cucurbita maxima]1.4e-21186.27Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELSL  +DKKLKP A  KEKEG R+  KA+AADY+KHYDA+N LS     EQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARLLKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

XP_023538477.1 RNA polymerase II-associated protein 3 isoform X1 [Cucurbita pepo subsp. pepo]8.3e-20985.84Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELSL  +DKKLKP A  KEKEG R+  KA+AADYLKHYDAV  LS    TEQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQ+HIEEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQA+LLKAISPAKLP IFKNAL+AP+LIDIVKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EK DLLKIWD VFCDEAVPIEYAEMLDSLRSKYFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

XP_038890655.1 RNA polymerase II-associated protein 3 isoform X3 [Benincasa hispida]8.3e-20985.22Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  +DFQGFLND+QDWELS K KDKKLKPQA  KEKEGRR+ EKASAADYLKHYDAVN LSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAIDCYSRSIALSPTAVAFANRAMAYLKI+R+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDA+FAQRLEPHNQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS++DKE V KSDSEAKI+D+ PVSSST RTGL AA+E ++EN  + A K S  L+E EDRS  AEI YK+ ATNGFHKD+S     G L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ER+ V RKQELKPSVQE AS AASRSMVEAAKNI APTTAYQFEVSWRGFSGD  LQARLLKAI+PAKLPQIFKNALTAP+L+DIVKCVA FFTEE ALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        I+FLENL +VPRF ILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

TrEMBL top hitse value%identityAlignment
A0A1S3BWU0 RNA polymerase II-associated protein 3 isoform X13.0e-20484.35Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWE+S K KDKKLKPQA GKEKE RR+ EKASAADYLK YDAVN LSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAIDCYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHA+LRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS +DK+ + KSDS+AKIQD+ PVSSST RTGL AA+E +EEN  + AVK S R++E ED S  AEI  K+ ATNGFHKD+S    L  L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ER+H+ RK ELK SVQELAS+AASRSMVEAAKNI APTTAYQFEVSWRGFS D ALQA LLK ISPAKLPQIFKNALTAP+LIDIVKCVA+FFTEE ALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        I+FLENL +VPRF ILMMCL SSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

A0A6J1DUX9 RNA polymerase II-associated protein 34.0e-24999.35Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDSSLDFQGFLNDMQDWELSLK KDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKE+GNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQ+TEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

A0A6J1FCA0 RNA polymerase II-associated protein 3 isoform X19.5e-21186.06Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELSL  +DKKLKP A  KEKEG R+  KA+AADY+KHYDAVN LS    TEQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS+++K+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARLLKAISPAKLPQIFKNAL+AP+LID VKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

A0A6J1HPT1 RNA polymerase II-associated protein 3 isoform X16.6e-21286.27Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  LDFQGFLND+QDWELSL  +DKKLKP A  KEKEG R+  KA+AADY+KHYDA+N LS     EQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARLLKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

A0A6J1HRS3 RNA polymerase II-associated protein 3 isoform X21.9e-20384.31Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRD  L          DWELSL  +DKKLKP A  KEKEG R+  KA+AADY+KHYDA+N LS     EQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS
        EAI CYSRSIALSPTAVAFANRAMAYLKI+RFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP+NQEIKKQHAELRAFVGK+
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKS

Query:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL
        ILEKASGASRSS++DK+ VGKSDSEAKIQD+ PVSSSTLR+GL AAQEH+EEN  +KAVK S RL+ TE RS  AEIRYKREATNG HKD  P+ NLG L
Subjt:  ILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGL

Query:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA
        ERNHV+RKQELKPSVQELASRAASRSMVEAAKNI APTTAYQFEVSWRGFSGD ALQARLLKAISPAKLPQIFKNAL+AP+LIDIVKCVA+FFTEEMALA
Subjt:  ERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALA

Query:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK
        I+FLENL +VPRF ILMMCLPS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YFLK
Subjt:  INFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLK

SwissProt top hitse value%identityAlignment
Q28IV3 RNA polymerase II-associated protein 32.9e-2329.14Show/hide
Query:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL
        +  + +Q    A  +K+ GN YFK+ K++ AIDCYS+ +    T A+  ANRAMAYLKI++++EAE DCT A++LD  Y KA++RR TAR  LGK KEA 
Subjt:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL

Query:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETE-
        ED E   +L+P N++   +            LEK S   RS+ +D     K + E K+  ++ V     +   +  +  + E V        + L E+  
Subjt:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETE-

Query:  ------DRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASRSMVE-------AAKNI---TAPTTAYQFEVSWRGFSGD
              D   +A+ +   E  N       PS  +  +E    T       S +E +    S   +E        + NI     PT ++Q E  +R   G+
Subjt:  ------DRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASRSMVE-------AAKNI---TAPTTAYQFEVSWRGFSGD

Query:  CALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK
          L  R LK I P+   ++F+ AL   +  +I+  +   +   +   L    L+ L+++ RF + +M L  S++
Subjt:  CALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK

Q5ZKQ3 RNA polymerase II-associated protein 31.0e-2829.95Show/hide
Query:  KKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQ
        KK++ QA   E   ++  E+A  ++  ++        R  + EQ    A +EK+ GN YFK+ K++ AI+CY+R IA   T A+  ANRAMAYLKI++++
Subjt:  KKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQ

Query:  EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAK--IQDV
        EAE+DCT+AL LD  Y KA++RR  AR  LGK KEA++D E   +LEP N++   +  ++R      + EK     +S  ++   V   +SE K  ++  
Subjt:  EAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAK--IQDV

Query:  H-PVSSSTLRTGLQAAQEHIEENVRQKAVKASTRL----------QETEDRSMEAEI------RYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPS
        H P++  + +   + A E ++++V      +ST L          + TE+   + ++      + K+         +SP L  G    + V     L PS
Subjt:  H-PVSSSTLRTGLQAAQEHIEENVRQKAVKASTRL----------QETEDRSMEAEI------RYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPS

Query:  VQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL-LKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVP
        + +   R    S   A+     P  ++Q E  +R    DC  +  L LK I P+  P++F+ +L   +   I++ +  F+   EE +L +  L+ L+++ 
Subjt:  VQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARL-LKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVP

Query:  RFGILMMCLPSSEK
        RF + +M +  SEK
Subjt:  RFGILMMCLPSSEK

Q68FQ7 RNA polymerase II-associated protein 32.8e-2629.78Show/hide
Query:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP
        A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLK+++++EAE DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E    LEP
Subjt:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEP

Query:  HNQEIKKQHAELRAFVGKSILEKA--SGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRY
         N++   + + ++    K ++EK         S+Q    V   DS       H  S   L+        ++ E+V   A ++S  + E++  ++  +   
Subjt:  HNQEIKKQHAELRAFVGKSILEKA--SGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRY

Query:  KREATNG--FHKDASPSLNLGGLE--------RNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTA--YQFEVSWRGFSGDCALQARLLKAISPA
        K++ + G       +P   +  +E        +  V  KQ ++ SV E  S   +++  + A  +  P  A  +Q E  +R       +  + +K I P+
Subjt:  KREATNG--FHKDASPSLNLGGLE--------RNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTA--YQFEVSWRGFSGDCALQARLLKAISPA

Query:  KLPQIFKNALTAPMLIDIVKCVASFFT--EEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKI
          P++F+  L   +   I+K +  F+   E+ AL    LE L+Q+ RF + +M +  +E+ +L K+
Subjt:  KLPQIFKNALTAPMLIDIVKCVASFFT--EEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKI

Q6NU95 RNA polymerase II-associated protein 32.0e-2428.8Show/hide
Query:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL
        +  + +Q    A  +K+ GN YFK+ K++ AI+CYS+ +    T A+  ANRAMAYLKI++++EAE DCT A++LD  Y KA++RR TA   LGK KEA 
Subjt:  RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEAL

Query:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETED
        ED E   +L+P N++              ++LE A  +    S +K++ G  DS  + + ++ V         +  +  + E V   A   +T L+ET  
Subjt:  EDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETED

Query:  RSMEAEIRYKREATNGFHKDAS-------PSLNLGGLERNHVTRKQELKPSVQE--LASRAASRSMVEAAKNIT---------APTTAYQFEVSWRGFSG
        R  ++        T   +++ +       PS  +  +E    T     +P+  E  L SR +   + +     +          PT ++Q E  +R   G
Subjt:  RSMEAEIRYKREATNGFHKDAS-------PSLNLGGLERNHVTRKQELKPSVQE--LASRAASRSMVEAAKNIT---------APTTAYQFEVSWRGFSG

Query:  DCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMA--LAINFLENLTQVPRFGILMMCLPSSEK
        +  L    LK I P    ++FK AL   +  DI+  +   F  + +  L    L+ L+++ RF + +M L  S+K
Subjt:  DCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMA--LAINFLENLTQVPRFGILMMCLPSSEK

Q9D706 RNA polymerase II-associated protein 33.1e-2530.65Show/hide
Query:  EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEF
        +Q    A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLKI+R++EAE DCT+A+ LD  Y KA++RR TAR  LGK  EA +D E 
Subjt:  EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEF

Query:  AQRLEPHNQE-------IKKQHAE--------LRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVH-PVSSSTLRTGLQAAQEHIEENVRQKAV
           LEP N++       IKK+  E        L +     +++      R S +  +KV   ++   I+ V  P SS+T+           E +    AV
Subjt:  AQRLEPHNQE-------IKKQHAE--------LRAFVGKSILEKASGASRSSSQDKEKVGKSDSEAKIQDVH-PVSSSTLRTGLQAAQEHIEENVRQKAV

Query:  KASTRLQETEDRSMEAEIRYKREA--TNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASR--SMVEAAKNITAPTTAYQFEVSWRGFSGDCA
           T+   +E  S+ A  R + +          ++P   +G         KQ+ +    E AS  A +    + AA     P  ++Q E  +R       
Subjt:  KASTRLQETEDRSMEAEIRYKREA--TNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASR--SMVEAAKNITAPTTAYQFEVSWRGFSGDCA

Query:  LQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK
        +  + +K I P+  P++F+  L   +   I+K +  F+   E+ AL    LE L+Q+ RF + +M +   E+
Subjt:  LQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFF--TEEMALAINFLENLTQVPRFGILMMCLPSSEK

Arabidopsis top hitse value%identityAlignment
AT1G56440.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.8e-12855.11Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRR--RAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRD + DFQGF ND+QDWELSLK KDKK+K Q            R   +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRR--RAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG
        F EAIDCYSRSIALSP AV +ANRAMAYLKIKR++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP +QE+KKQ+A++++ + 
Subjt:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG

Query:  KSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQET---EDRSME--------AEIRYKREATNG-
        K I+EKA+GA +S++Q+  K   S  + KIQ      +S   T +      I + V      +  +L E    E++S E         EI   ++ T G 
Subjt:  KSILEKASGASRSSSQDKEKVGKSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQET---EDRSME--------AEIRYKREATNG-

Query:  --FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPM
          + K+A PS   G       N V+++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +P+ LPQIFKNALT+P+
Subjt:  --FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPM

Query:  LIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        L+DI+KCVASFFTE+M LA+ ++ENLT+VPRF +L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y LKQ
Subjt:  LIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

AT1G56440.2 Tetratricopeptide repeat (TPR)-like superfamily protein6.5e-12753.94Show/hide
Query:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRR--RAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRD + DFQGF ND+QDWELSLK KDKK+K Q            R   +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRR--RAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG
        F EAIDCYSRSIALSP AV +ANRAMAYLKIKR++EAE DCTEALNLDDRYIKAYSRRATARKELG  KEA EDAEFA RLEP +QE+KKQ+A++++ + 
Subjt:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVG

Query:  KSILEKASGASRSSSQD-------KEKVGKSDSEAKIQD-----------VHPVSSSTLRTG---LQAAQEHIEENVRQK-AVKASTRLQE-TEDRSME-
        K I+EKA+GA +S++Q+        +K+ K  +E   +            V PV  S   +G   ++  Q     N R+  ++  S  LQE +++ SM+ 
Subjt:  KSILEKASGASRSSSQD-------KEKVGKSDSEAKIQD-----------VHPVSSSTLRTG---LQAAQEHIEENVRQK-AVKASTRLQE-TEDRSME-

Query:  ---AEIRYKREATNG---FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAIS
            EI   ++ T G   + K+A PS   G       N V+++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +
Subjt:  ---AEIRYKREATNG---FHKDASPSLNLG---GLERNHVTRKQELKPSVQELASRAASRSMVEAAKNITAPTTAYQFEVSWRGFSGDCALQARLLKAIS

Query:  PAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ
        P+ LPQIFKNALT+P+L+DI+KCVASFFTE+M LA+ ++ENLT+VPRF +L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y LKQ
Subjt:  PAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFLKQ

AT2G42810.1 protein phosphatase 5.28.7e-1539.1Show/hide
Query:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALED
        + E S V  A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K++ +  A  D ++A+ +D RY K Y RR  A   +GK K+AL+D
Subjt:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALED

Query:  AEFAQRLEPHNQEIKKQHAELRAFVGKSILEKA
         +  +RL P++ +  ++  E    V K   E+A
Subjt:  AEFAQRLEPHNQEIKKQHAELRAFVGKSILEKA

AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III5.8e-1946.85Show/hide
Query:  KEQGNEYFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE
        KE+GN+ FK+K +++AI  YS +I LS   A  ++NRA AYL++  F +AE+DCT+A+ LD + +KAY RR TAR+ LG  K A+ED  +A  LEP+N+ 
Subjt:  KEQGNEYFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE

Query:  IKKQHAELRAF
               LR F
Subjt:  IKKQHAELRAF

AT5G09420.1 translocon at the outer membrane of chloroplasts 64-V3.9e-1541.07Show/hide
Query:  KEQGNEYFKQKKFKEAIDCYSRSIALS-PTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE
        KE+GN  +K K++ +A++ Y+ +I L+   A  + NRA A+L++  FQ+AE DCT+A+ +D + +KAY RR TAR+ L + KEA  D   A  LEP N+ 
Subjt:  KEQGNEYFKQKKFKEAIDCYSRSIALS-PTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQE

Query:  IKKQHAELRAFV
         K     LR  +
Subjt:  IKKQHAELRAFV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTCCTCCGGCAAGCACGGGCGTGATAGCTCTCTGGATTTCCAGGGATTTTTGAATGACATGCAGGATTGGGAACTCTCCCTTAAGGTAAAGGACAAGAAATT
GAAGCCGCAGGCCTTTGGTAAAGAAAAGGAGGGTAGAAGGCGGGCAGAAAAGGCTTCTGCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCACCTATCTAGAAATT
TTCAGACTGAACAGAGTTTTGTGGATGCTGCTTCAGAGAAGGAACAGGGTAATGAGTATTTTAAGCAAAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATT
GCTTTATCACCAACAGCTGTAGCGTTTGCAAATAGGGCCATGGCCTACCTAAAGATCAAAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGA
TCGATATATTAAAGCATATTCACGCCGAGCAACGGCTAGAAAAGAACTTGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACC
AAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAATCGATTCTTGAGAAGGCATCTGGTGCTTCAAGAAGCTCCTCACAAGATAAGGAGAAGGTTGGA
AAATCTGACTCTGAAGCTAAAATTCAGGACGTCCATCCTGTCTCAAGCAGCACACTAAGGACAGGATTACAGGCAGCTCAAGAACACATTGAAGAAAATGTCAGGCAGAA
AGCTGTTAAGGCATCTACACGTTTACAGGAAACTGAGGACAGAAGTATGGAAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCTAGCCCAA
GTTTGAATTTGGGGGGATTGGAGAGAAATCATGTTACAAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCT
GCCAAAAACATCACAGCCCCAACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGGTTCTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGC
CAAGTTGCCTCAGATATTCAAAAATGCACTAACGGCTCCAATGTTAATAGACATTGTGAAGTGCGTGGCTTCCTTTTTCACTGAAGAGATGGCATTGGCTATCAACTTTT
TAGAAAATTTAACCCAGGTTCCAAGATTCGGCATACTCATGATGTGTCTTCCATCCTCTGAAAAGTTTGATCTTCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCT
GTTCCTATTGAGTACGCAGAAATGCTTGATAGCTTGCGTTCGAAGTACTTTCTTAAACAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTCCTCCGGCAAGCACGGGCGTGATAGCTCTCTGGATTTCCAGGGATTTTTGAATGACATGCAGGATTGGGAACTCTCCCTTAAGGTAAAGGACAAGAAATT
GAAGCCGCAGGCCTTTGGTAAAGAAAAGGAGGGTAGAAGGCGGGCAGAAAAGGCTTCTGCAGCTGATTACTTGAAGCACTATGATGCAGTTAACCACCTATCTAGAAATT
TTCAGACTGAACAGAGTTTTGTGGATGCTGCTTCAGAGAAGGAACAGGGTAATGAGTATTTTAAGCAAAAGAAGTTTAAAGAAGCTATTGACTGCTATTCAAGAAGTATT
GCTTTATCACCAACAGCTGTAGCGTTTGCAAATAGGGCCATGGCCTACCTAAAGATCAAAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGA
TCGATATATTAAAGCATATTCACGCCGAGCAACGGCTAGAAAAGAACTTGGGAAGGCTAAAGAAGCCTTGGAGGATGCTGAATTTGCCCAGAGGTTGGAGCCTCACAACC
AAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTTTTGTTGGGAAATCGATTCTTGAGAAGGCATCTGGTGCTTCAAGAAGCTCCTCACAAGATAAGGAGAAGGTTGGA
AAATCTGACTCTGAAGCTAAAATTCAGGACGTCCATCCTGTCTCAAGCAGCACACTAAGGACAGGATTACAGGCAGCTCAAGAACACATTGAAGAAAATGTCAGGCAGAA
AGCTGTTAAGGCATCTACACGTTTACAGGAAACTGAGGACAGAAGTATGGAAGCTGAAATCAGATACAAAAGAGAAGCAACAAATGGTTTTCACAAAGATGCTAGCCCAA
GTTTGAATTTGGGGGGATTGGAGAGAAATCATGTTACAAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGTATGGTTGAAGCT
GCCAAAAACATCACAGCCCCAACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGGTTCTCTGGTGATTGTGCACTGCAGGCTCGTCTTTTGAAGGCCATCTCTCCAGC
CAAGTTGCCTCAGATATTCAAAAATGCACTAACGGCTCCAATGTTAATAGACATTGTGAAGTGCGTGGCTTCCTTTTTCACTGAAGAGATGGCATTGGCTATCAACTTTT
TAGAAAATTTAACCCAGGTTCCAAGATTCGGCATACTCATGATGTGTCTTCCATCCTCTGAAAAGTTTGATCTTCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCT
GTTCCTATTGAGTACGCAGAAATGCTTGATAGCTTGCGTTCGAAGTACTTTCTTAAACAA
Protein sequenceShow/hide protein sequence
MADSSGKHGRDSSLDFQGFLNDMQDWELSLKVKDKKLKPQAFGKEKEGRRRAEKASAADYLKHYDAVNHLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSI
ALSPTAVAFANRAMAYLKIKRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKEALEDAEFAQRLEPHNQEIKKQHAELRAFVGKSILEKASGASRSSSQDKEKVG
KSDSEAKIQDVHPVSSSTLRTGLQAAQEHIEENVRQKAVKASTRLQETEDRSMEAEIRYKREATNGFHKDASPSLNLGGLERNHVTRKQELKPSVQELASRAASRSMVEA
AKNITAPTTAYQFEVSWRGFSGDCALQARLLKAISPAKLPQIFKNALTAPMLIDIVKCVASFFTEEMALAINFLENLTQVPRFGILMMCLPSSEKFDLLKIWDEVFCDEA
VPIEYAEMLDSLRSKYFLKQ