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MS007284 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007284
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionRibulose bisphosphate carboxylase large chain
Genome locationscaffold25:1992624..1992870
RNA-Seq ExpressionMS007284
SyntenyMS007284
Gene Ontology termsGO:0009767 - photosynthetic electron transport chain (biological process)
GO:0009853 - photorespiration (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0019253 - reductive pentose-phosphate cycle (biological process)
GO:0005840 - ribosome (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0009536 - plastid (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004497 - monooxygenase activity (molecular function)
GO:0016168 - chlorophyll binding (molecular function)
GO:0016984 - ribulose-bisphosphate carboxylase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KJB79837.1 hypothetical protein B456_013G068900 [Gossypium raimondii]9.0e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
PPR83387.1 hypothetical protein GOBAR_AA37329 [Gossypium barbadense]2.8e-1980.3Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQFWIQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
TYG79516.1 hypothetical protein ES288_D02G144500v1, partial [Gossypium darwinii]5.3e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
TYI03364.1 hypothetical protein ES332_A11G333500v1 [Gossypium tomentosum]1.2e-1778.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
TYJ12281.1 hypothetical protein E1A91_A11G338200v1, partial [Gossypium mustelinum]9.0e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
TrEMBL top hitse value%identityAlignment
A0A0D2S9P0 Uncharacterized protein4.4e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
A0A2P5VX61 Uncharacterized protein1.4e-1980.3Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQFWIQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
A0A5D2DGW6 Uncharacterized protein (Fragment)2.6e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
A0A5D2NJX8 Uncharacterized protein5.7e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
A0A5D2XHD7 Uncharacterized protein (Fragment)4.4e-1878.79Show/hide
Query:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
        SSKGSRR TK RK  SFRKWIPIRRVHN M+KLTLTRQF IQF I LGG+ KEL+CNNIDSYR +R
Subjt:  SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEI-LGGMGKELKCNNIDSYRYRR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TCATCGAAAGGATCTCGAAGACCCACCAAAGTACGAAAGCTAGAATCTTTCAGAAAATGGATTCCTATTCGAAGAGTGCATAACTGCATGGAGAAGCTCACACTAACCCG
TCAATTTTGGATCCAATTCGAAATTTTGGGAGGTATGGGGAAGGAATTGAAATGTAATAATATCGATTCATACAGATACAGAAGAAAAGGTTCTCTGTTGATTCAAACAC
TGTACCCGCGAGACAGGGATAGA
mRNA sequenceShow/hide mRNA sequence
TCATCGAAAGGATCTCGAAGACCCACCAAAGTACGAAAGCTAGAATCTTTCAGAAAATGGATTCCTATTCGAAGAGTGCATAACTGCATGGAGAAGCTCACACTAACCCG
TCAATTTTGGATCCAATTCGAAATTTTGGGAGGTATGGGGAAGGAATTGAAATGTAATAATATCGATTCATACAGATACAGAAGAAAAGGTTCTCTGTTGATTCAAACAC
TGTACCCGCGAGACAGGGATAGA
Protein sequenceShow/hide protein sequence
SSKGSRRPTKVRKLESFRKWIPIRRVHNCMEKLTLTRQFWIQFEILGGMGKELKCNNIDSYRYRRKGSLLIQTLYPRDRDR