; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007300 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007300
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein RALF-like 33
Genome locationscaffold25:2107377..2107739
RNA-Seq ExpressionMS007300
SyntenyMS007300
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586247.1 Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. sororia]8.6e-5791.6Show/hide
Query:  MAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQP
        MAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEEFEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNCQP
Subjt:  MAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQP

Query:  GAQANPYGRGCSAITRCRS
        GAQANPY RGCSAITRCRS
Subjt:  GAQANPYGRGCSAITRCRS

XP_022150733.1 protein RALF-like 33 [Momordica charantia]1.2e-6199.17Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGFHSPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPYGRGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

XP_022937540.1 protein RALF-like 33 [Cucurbita moschata]7.8e-5891.74Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEEFEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

XP_022966015.1 protein RALF-like 33 [Cucurbita maxima]9.2e-5992.56Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIP+QS+CKG+IAECFGGEEFEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

XP_038889183.1 protein RALF-like 33 [Benincasa hispida]2.4e-5992.56Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+SPTFFLICAAVFV+F+CSSTAVH GLGIHHSLAWIP+QS+CKGSIAECFGGEEFEFDSEI+RRILATSQYISYGAL+RNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFW9 Uncharacterized protein5.5e-5788.43Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+SPTFFLICAAVF++F+CSST VH GLGI HSLAWIP+QS+CKGSIAECFGGEEFEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGC+AITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

A0A5A7TYI2 Rapid ALkalinization Factor3.0e-5586.78Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+SPTFFLI AAVF++F+CSSTAVH G+GI +SLAWIP+QS+CKGSIAECFGGEEFEFDSEI+RRILATSQYISYGAL+RN VPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGC+AITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

A0A6J1DA82 protein RALF-like 335.6e-6299.17Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGFHSPT FLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPYGRGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

A0A6J1FH12 protein RALF-like 333.8e-5891.74Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGI HSL WIP+QS+CKG+IAECFGGEEFEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

A0A6J1HQE4 protein RALF-like 334.5e-5992.56Show/hide
Query:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC
        MAMAGF+S TFFLICAAVFVVF+CSSTAVHGGLGIHHSL WIP+QS+CKG+IAECFGGEEFEFDSEISRRILATSQYISYGAL+RNTVPCSRRGASYYNC
Subjt:  MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNC

Query:  QPGAQANPYGRGCSAITRCRS
        QPGAQANPY RGCSAITRCRS
Subjt:  QPGAQANPYGRGCSAITRCRS

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 339.4e-3074.7Show/hide
Query:  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        ++P +S C G+IAEC      EEFE DSEI+RRILAT++YISYGAL+RNTVPCSRRGASYYNC+ GAQANPY RGCSAITRCR
Subjt:  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR

Q945T0 Rapid alkalinization factor2.7e-2958.77Show/hide
Query:  PTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQAN
        P+  ++C  +   F   S A  G  G +  +        CKGSI EC    EEFE DSE +RRILAT +YISYGAL++N+VPCSRRGASYYNC+PGAQAN
Subjt:  PTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQAN

Query:  PYGRGCSAITRCRS
        PY RGCSAITRCRS
Subjt:  PYGRGCSAITRCRS

Q9LUS7 Rapid alkalinization factor 235.1e-2865.26Show/hide
Query:  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        P ++ C+G+IAEC             +G    GEEFE DSEI+RRILAT +YISYGAL+RNT+PCSRRGASYYNC+ GAQANPY RGCSAITRCR
Subjt:  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR

Q9MA62 Protein RALF-like 221.5e-2777.63Show/hide
Query:  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        S C GSIAEC    EE EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GAQANPY RGCS ITRCR
Subjt:  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR

Q9SRY3 Protein RALF-like 19.4e-3062.07Show/hide
Query:  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQ
        T FL    + VVF  SS  V  G       +AW     + S C GSIAEC G EE E DSEI+RRILAT++YISY +LKRN+VPCSRRGASYYNCQ GAQ
Subjt:  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQ

Query:  ANPYGRGCSAITRCRS
        ANPY RGCS I RCRS
Subjt:  ANPYGRGCSAITRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 16.6e-3162.07Show/hide
Query:  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQ
        T FL    + VVF  SS  V  G       +AW     + S C GSIAEC G EE E DSEI+RRILAT++YISY +LKRN+VPCSRRGASYYNCQ GAQ
Subjt:  TFFLICAAVFVVFTCSSTAVHGGLGIH-HSLAWI---PDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQ

Query:  ANPYGRGCSAITRCRS
        ANPY RGCS I RCRS
Subjt:  ANPYGRGCSAITRCRS

AT2G33775.1 ralf-like 193.0e-1559.38Show/hide
Query:  GGEEFEFDSEISRRILATSQ-YISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRC
        G  ++  DSE +RR LA  + YISYGAL++N VPCSRRG SYY+C+   +ANPY RGCS IT C
Subjt:  GGEEFEFDSEISRRILATSQ-YISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRC

AT3G05490.1 ralf-like 221.1e-2877.63Show/hide
Query:  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        S C GSIAEC    EE EFDS+ISRRILA  +YISYGA++RN+VPCSRRGASYYNCQ GAQANPY RGCS ITRCR
Subjt:  SSCKGSIAECFG-GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR

AT3G16570.1 rapid alkalinization factor 233.6e-2965.26Show/hide
Query:  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        P ++ C+G+IAEC             +G    GEEFE DSEI+RRILAT +YISYGAL+RNT+PCSRRGASYYNC+ GAQANPY RGCSAITRCR
Subjt:  PDQSSCKGSIAEC-------------FG----GEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR

AT4G15800.1 ralf-like 336.6e-3174.7Show/hide
Query:  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR
        ++P +S C G+IAEC      EEFE DSEI+RRILAT++YISYGAL+RNTVPCSRRGASYYNC+ GAQANPY RGCSAITRCR
Subjt:  WIPDQSSCKGSIAEC---FGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYGRGCSAITRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATGGCCGGATTCCATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTGGTCTTCACCTGCTCCTCAACCGCCGTTCACGGCGGCCTCGGGATCCACCA
CAGCCTCGCATGGATTCCGGACCAATCGTCCTGCAAGGGCTCCATAGCAGAGTGCTTCGGCGGCGAGGAGTTCGAATTTGATTCGGAAATCAGCCGCCGCATCCTGGCCA
CCAGCCAGTACATCAGCTACGGCGCTCTGAAGAGGAACACTGTGCCGTGCTCTAGACGCGGCGCCTCCTATTACAACTGCCAGCCTGGAGCTCAAGCCAATCCCTACGGT
CGTGGCTGCAGCGCCATCACGAGGTGCAGGAGT
mRNA sequenceShow/hide mRNA sequence
ATGGCAATGGCCGGATTCCATTCTCCGACCTTCTTCCTGATCTGCGCCGCCGTGTTTGTGGTCTTCACCTGCTCCTCAACCGCCGTTCACGGCGGCCTCGGGATCCACCA
CAGCCTCGCATGGATTCCGGACCAATCGTCCTGCAAGGGCTCCATAGCAGAGTGCTTCGGCGGCGAGGAGTTCGAATTTGATTCGGAAATCAGCCGCCGCATCCTGGCCA
CCAGCCAGTACATCAGCTACGGCGCTCTGAAGAGGAACACTGTGCCGTGCTCTAGACGCGGCGCCTCCTATTACAACTGCCAGCCTGGAGCTCAAGCCAATCCCTACGGT
CGTGGCTGCAGCGCCATCACGAGGTGCAGGAGT
Protein sequenceShow/hide protein sequence
MAMAGFHSPTFFLICAAVFVVFTCSSTAVHGGLGIHHSLAWIPDQSSCKGSIAECFGGEEFEFDSEISRRILATSQYISYGALKRNTVPCSRRGASYYNCQPGAQANPYG
RGCSAITRCRS