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MS007306 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007306
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein SRC2
Genome locationscaffold25:2154119..2154610
RNA-Seq ExpressionMS007306
SyntenyMS007306
Gene Ontology termsNA
InterPro domainsIPR000008 - C2 domain
IPR035892 - C2 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8010230.1 hypothetical protein FH972_006616 [Carpinus fangiana]5.3e-1739.63Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
        M  D+R F IN+TC EG K     V       VYA VS+ G   +   T +  YF DN     PM+  LEES+L Q+ L + I+LR +R+  GD+ IAE 
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA

Query:  FVRLGNLL-NCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP
         + +  L  NC+D      DQ  G   + +P+   +G LYFSY FG  I AI   D  GV+A P
Subjt:  FVRLGNLL-NCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP

KAG6586252.1 Protein SRC2, partial [Cucurbita argyrosperma subsp. sororia]2.8e-5064.78Show/hide
Query:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR
        D+R F +N+TC EG +GVLSFVNFF K+KVYAAVS+ G   A Q TPLA YFG+NPVWN+PM+F L+ES+LQ++ALTLRI+LRRKRIFGGDE IAEA V 
Subjt:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR

Query:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP
        L NL    D N N MD+    SWLLSP+GGRRG +YFSY F RT  A   SDG  +VAP
Subjt:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP

XP_022150754.1 protein SRC2 [Momordica charantia]9.5e-9198.78Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
        MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPA+QFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA

Query:  FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPPC
        FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRA ERSDGGGVVAPPC
Subjt:  FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPPC

XP_022938307.1 protein SRC2 [Cucurbita moschata]2.8e-5064.78Show/hide
Query:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR
        D+R F +N+TC EG +GVLSFVNFF K+KVYAAVS+ G   A Q TPLA YFG+NPVWN+PM+F L+ES+LQ++ALTLRI+LRRKRIFGGDE IAEA V 
Subjt:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR

Query:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP
        L NL    D N N MD+    SWLLSP+GGRRG +YFSY F RT  A   SDG  +VAP
Subjt:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP

XP_031736682.1 protein SRC2 homolog [Cucumis sativus]1.9e-4359.15Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFG-GDEAIAE
        M  D+R  ++NIT AEG KGVLSF NFF K+KVYAAVSV G   A Q TPLA YFG NPVWN  MRF LEES+LQ++ALTL+I+L+R+R FG  DE IAE
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFG-GDEAIAE

Query:  AFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP
        A + L NL N N+   N  ++ C  S++LS +GG RG++YFSYCF RT  A + SD G  VAPP
Subjt:  AFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP

TrEMBL top hitse value%identityAlignment
A0A0A0LIU2 C2 domain-containing protein9.4e-4459.15Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFG-GDEAIAE
        M  D+R  ++NIT AEG KGVLSF NFF K+KVYAAVSV G   A Q TPLA YFG NPVWN  MRF LEES+LQ++ALTL+I+L+R+R FG  DE IAE
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFG-GDEAIAE

Query:  AFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP
        A + L NL N N+   N  ++ C  S++LS +GG RG++YFSYCF RT  A + SD G  VAPP
Subjt:  AFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP

A0A5A7TWY8 Protein SRC2-like5.7e-1759.09Show/hide
Query:  VYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGG-DEAIAEAFVRLGNLLNCNDSNLNFMD
        VYAAV V G   A Q TPL  +FG+NPVWNFPMRF LEES+LQ++ALTL+I+L+RKR F G  E I EA + L NL N N +  N  D
Subjt:  VYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGG-DEAIAEAFVRLGNLLNCNDSNLNFMD

A0A5N6QV91 Uncharacterized protein2.6e-1739.63Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
        M  D+R F IN+TC EG K     V       VYA VS+ G   +   T +  YF DN     PM+  LEES+L Q+ L + I+LR +R+  GD+ IAE 
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA

Query:  FVRLGNLL-NCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP
         + +  L  NC+D      DQ  G   + +P+   +G LYFSY FG  I AI   D  GV+A P
Subjt:  FVRLGNLL-NCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPP

A0A6J1DB07 protein SRC24.6e-9198.78Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
        MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPA+QFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEA

Query:  FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPPC
        FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRA ERSDGGGVVAPPC
Subjt:  FVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPPC

A0A6J1FDP3 protein SRC21.4e-5064.78Show/hide
Query:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR
        D+R F +N+TC EG +GVLSFVNFF K+KVYAAVS+ G   A Q TPLA YFG+NPVWN+PM+F L+ES+LQ++ALTLRI+LRRKRIFGGDE IAEA V 
Subjt:  DFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVR

Query:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP
        L NL    D N N MD+    SWLLSP+GGRRG +YFSY F RT  A   SDG  +VAP
Subjt:  LGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAP

SwissProt top hitse value%identityAlignment
O04133 Protein SRC21.0e-1032.24Show/hide
Query:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGG--EPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIA
        M+ ++R   +NI  A+  K     VN F K  VYAAVS+ G    P    T +    G NP WN+P++F + ES  +++ L+L I+L   R   GD  I 
Subjt:  MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGG--EPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIA

Query:  EAFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRA
           V L  LL+    + +F         ++  +   +G L FSY FG  + A
Subjt:  EAFVRLGNLLNCNDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRA

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGACTGATTTCAGAGAATTCAACATAAACATCACCTGCGCCGAAGGCCAAAAAGGCGTTCTCAGTTTCGTCAATTTTTTCCAGAAAACCAAAGTTTACGCGGCCGT
CTCCGTCGTCGGAGGCGAGCCGGCCATCCAATTTACGCCGCTCGCTAACTACTTCGGCGACAATCCGGTCTGGAATTTTCCGATGAGATTCTGTTTGGAGGAATCGGAGC
TGCAGCAGGATGCCCTAACTCTGAGGATTGAACTCCGCAGGAAACGAATTTTTGGAGGAGACGAAGCCATTGCCGAAGCTTTCGTTCGGCTCGGAAATCTTTTGAATTGT
AATGATTCGAATTTGAATTTTATGGATCAAATTTGCGGTTTCTCGTGGCTTCTCTCGCCGGCCGGCGGCCGCCGCGGCATTTTGTATTTTTCGTATTGCTTTGGCCGGAC
GATTCGTGCCATTGAACGGAGTGACGGCGGAGGCGTCGTCGCTCCGCCGTGT
mRNA sequenceShow/hide mRNA sequence
ATGTCGACTGATTTCAGAGAATTCAACATAAACATCACCTGCGCCGAAGGCCAAAAAGGCGTTCTCAGTTTCGTCAATTTTTTCCAGAAAACCAAAGTTTACGCGGCCGT
CTCCGTCGTCGGAGGCGAGCCGGCCATCCAATTTACGCCGCTCGCTAACTACTTCGGCGACAATCCGGTCTGGAATTTTCCGATGAGATTCTGTTTGGAGGAATCGGAGC
TGCAGCAGGATGCCCTAACTCTGAGGATTGAACTCCGCAGGAAACGAATTTTTGGAGGAGACGAAGCCATTGCCGAAGCTTTCGTTCGGCTCGGAAATCTTTTGAATTGT
AATGATTCGAATTTGAATTTTATGGATCAAATTTGCGGTTTCTCGTGGCTTCTCTCGCCGGCCGGCGGCCGCCGCGGCATTTTGTATTTTTCGTATTGCTTTGGCCGGAC
GATTCGTGCCATTGAACGGAGTGACGGCGGAGGCGTCGTCGCTCCGCCGTGT
Protein sequenceShow/hide protein sequence
MSTDFREFNINITCAEGQKGVLSFVNFFQKTKVYAAVSVVGGEPAIQFTPLANYFGDNPVWNFPMRFCLEESELQQDALTLRIELRRKRIFGGDEAIAEAFVRLGNLLNC
NDSNLNFMDQICGFSWLLSPAGGRRGILYFSYCFGRTIRAIERSDGGGVVAPPC