; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

MS007314 (gene) of Bitter gourd (TR) v1 genome

Gene IDMS007314
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionprotein ALWAYS EARLY 2-like isoform X1
Genome locationscaffold25:2205733..2205936
RNA-Seq ExpressionMS007314
SyntenyMS007314
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0017053 - transcriptional repressor complex (cellular component)
InterPro domainsIPR010561 - Protein LIN-9/Protein ALWAYS EARLY
IPR028306 - Protein ALWAYS EARLY, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022150725.1 protein ALWAYS EARLY 2-like isoform X2 [Momordica charantia]1.2e-28100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

XP_022150726.1 protein ALWAYS EARLY 3-like isoform X3 [Momordica charantia]1.2e-28100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

XP_022150727.1 protein ALWAYS EARLY 2-like isoform X4 [Momordica charantia]1.2e-28100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

XP_022150728.1 protein ALWAYS EARLY 2-like isoform X5 [Momordica charantia]1.2e-28100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

XP_022150729.1 protein ALWAYS EARLY 2-like isoform X6 [Momordica charantia]1.2e-28100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

TrEMBL top hitse value%identityAlignment
A0A6J1D9A8 protein ALWAYS EARLY 2-like isoform X26.0e-29100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

A0A6J1DA78 protein ALWAYS EARLY 2-like isoform X56.0e-29100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

A0A6J1DAY2 protein ALWAYS EARLY 2-like isoform X66.0e-29100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

A0A6J1DBI5 protein ALWAYS EARLY 2-like isoform X46.0e-29100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

A0A6J1DCD4 protein ALWAYS EARLY 3-like isoform X36.0e-29100Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

SwissProt top hitse value%identityAlignment
Q6A332 Protein ALWAYS EARLY 32.4e-0649.23Show/hide
Query:  PRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        PR VGKRTPR PIS +  +D  E   S  K     + D   D++EH  ALAL EASQR GS   S
Subjt:  PRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

Q6A333 Protein ALWAYS EARLY 24.1e-0647.06Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        G Q    GKRTPR P+  S  RD+ E     +K  +K + D N D+V H  ALALT+AS+R GSP  S
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

Arabidopsis top hitse value%identityAlignment
AT3G05380.1 DIRP ;Myb-like DNA-binding domain2.9e-0747.06Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        G Q    GKRTPR P+  S  RD+ E     +K  +K + D N D+V H  ALALT+AS+R GSP  S
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

AT3G05380.2 DIRP ;Myb-like DNA-binding domain2.9e-0747.06Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        G Q    GKRTPR P+  S  RD+ E     +K  +K + D N D+V H  ALALT+AS+R GSP  S
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

AT3G05380.3 DIRP ;Myb-like DNA-binding domain2.9e-0747.06Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        G Q    GKRTPR P+  S  RD+ E     +K  +K + D N D+V H  ALALT+AS+R GSP  S
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

AT3G05380.5 DIRP ;Myb-like DNA-binding domain2.9e-0747.06Show/hide
Query:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        G Q    GKRTPR P+  S  RD+ E     +K  +K + D N D+V H  ALALT+AS+R GSP  S
Subjt:  GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS

AT3G21430.2 DNA binding1.7e-0749.23Show/hide
Query:  PRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS
        PR VGKRTPR PIS +  +D  E   S  K     + D   D++EH  ALAL EASQR GS   S
Subjt:  PRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGTGATCAACCTCGTGTTGTGGGGAAAAGGACACCTCGATTTCCTATTTCATGTTCAAATACAAGAGATGAATGGGAAAGTCGTGCTTCTGAAAGTAAAAGTTGGCAGAA
ATCAGAAGTTGATGTTAATAGTGACGAAGTTGAACATGTTGCCGCCTTAGCTTTGACTGAAGCCTCACAAAGAAGAGGCTCTCCCTCAACATCT
mRNA sequenceShow/hide mRNA sequence
GGTGATCAACCTCGTGTTGTGGGGAAAAGGACACCTCGATTTCCTATTTCATGTTCAAATACAAGAGATGAATGGGAAAGTCGTGCTTCTGAAAGTAAAAGTTGGCAGAA
ATCAGAAGTTGATGTTAATAGTGACGAAGTTGAACATGTTGCCGCCTTAGCTTTGACTGAAGCCTCACAAAGAAGAGGCTCTCCCTCAACATCT
Protein sequenceShow/hide protein sequence
GDQPRVVGKRTPRFPISCSNTRDEWESRASESKSWQKSEVDVNSDEVEHVAALALTEASQRRGSPSTS